Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 AC093503.3-201ENST00000624917 2352 ntBASIC13.92□□□□□ -0.18
LRRK2Q5S007 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 TARDBPP1-201ENST00000442013 1203 ntBASIC13.92□□□□□ -0.18
LRRK2Q5S007 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 HSPB1P2-201ENST00000448722 546 ntBASIC13.92□□□□□ -0.18
LRRK2Q5S007 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRK2Q5S007 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRK2Q5S007 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 AC106820.2-201ENST00000563775 3264 ntBASIC13.91□□□□□ -0.18
LRRK2Q5S007 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 ACKR1-201ENST00000368121 1240 ntBASIC13.91□□□□□ -0.18
LRRK2Q5S007 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 PRKXP1-201ENST00000561423 1122 ntBASIC13.91□□□□□ -0.18
LRRK2Q5S007 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRRK2Q5S007 AC023310.1-201ENST00000554836 735 ntBASIC13.91□□□□□ -0.18
LRRK2Q5S007 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.91□□□□□ -0.18
LRRK2Q5S007 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 TUBB8P12-201ENST00000308911 1335 ntBASIC13.9□□□□□ -0.18
LRRK2Q5S007 TUBB7P-202ENST00000428444 1305 ntBASIC13.9□□□□□ -0.18
LRRK2Q5S007 TUBB8P7-204ENST00000567960 1332 ntBASIC13.9□□□□□ -0.18
LRRK2Q5S007 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 AC022217.1-201ENST00000521069 738 ntBASIC13.9□□□□□ -0.18
LRRK2Q5S007 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 SNX33P1-201ENST00000592116 1762 ntBASIC13.9□□□□□ -0.18
LRRK2Q5S007 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRRK2Q5S007 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.9□□□□□ -0.18
LRRK2Q5S007 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms