Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 CNN2P11-201ENST00000429351 262 ntBASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 DNAJB3-202ENST00000449667 1266 ntBASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PRICKLE4Q2TBC4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 HAUS4P1-201ENST00000406739 1145 ntBASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 GPS2P2-201ENST00000430745 888 ntBASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 AC023141.5-201ENST00000458585 616 ntBASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 ALG1L8P-201ENST00000533887 760 ntBASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 SNHG9-202ENST00000564014 471 ntBASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 RARRES2P9-201ENST00000565168 469 ntBASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 AC009093.7-201ENST00000623853 1223 ntBASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 AC008677.1-201ENST00000519230 1561 ntBASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRICKLE4Q2TBC4 CDC14C-201ENST00000428251 1719 ntBASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 AC069224.1-201ENST00000566372 1715 ntBASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 AL596442.2-201ENST00000610240 980 ntBASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 CROCCP1-201ENST00000426910 5675 ntBASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PRICKLE4Q2TBC4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms