Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H3Q16695 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST3H3Q16695 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST3H3Q16695 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H3Q16695 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H3Q16695 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST3H3Q16695 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.39□□□□□ -0.11
HIST3H3Q16695 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
HIST3H3Q16695 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H3Q16695 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H3Q16695 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HIST3H3Q16695 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST3H3Q16695 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.39□□□□□ -0.11
HIST3H3Q16695 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 LINC02199-201ENST00000506655 2702 ntBASIC14.38□□□□□ -0.11
HIST3H3Q16695 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 AC010491.1-201ENST00000563101 2797 ntBASIC14.38□□□□□ -0.11
HIST3H3Q16695 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST3H3Q16695 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST3H3Q16695 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 FAM220BP-201ENST00000377689 816 ntBASIC14.37□□□□□ -0.11
HIST3H3Q16695 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 HAUS4P1-201ENST00000406739 1145 ntBASIC14.37□□□□□ -0.11
HIST3H3Q16695 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 AC024267.1-201ENST00000582320 895 ntBASIC14.37□□□□□ -0.11
HIST3H3Q16695 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 AC105339.1-204ENST00000636249 355 ntBASIC14.37□□□□□ -0.11
HIST3H3Q16695 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 AC007950.2-201ENST00000615045 2347 ntBASIC14.37□□□□□ -0.11
HIST3H3Q16695 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HIST3H3Q16695 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST3H3Q16695 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HIST3H3Q16695 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST3H3Q16695 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms