Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VPS72Q15906 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.98■□□□□ 0.95
VPS72Q15906 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VPS72Q15906 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS72Q15906 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
VPS72Q15906 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VPS72Q15906 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
VPS72Q15906 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS72Q15906 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
VPS72Q15906 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.98■□□□□ 0.95
VPS72Q15906 HSPB1P2-201ENST00000448722 546 ntBASIC20.98■□□□□ 0.95
VPS72Q15906 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS72Q15906 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS72Q15906 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS72Q15906 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS72Q15906 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS72Q15906 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS72Q15906 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS72Q15906 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
VPS72Q15906 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS72Q15906 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS72Q15906 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS72Q15906 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS72Q15906 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS72Q15906 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS72Q15906 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS72Q15906 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS72Q15906 AL133466.1-201ENST00000447582 150 ntBASIC20.97■□□□□ 0.95
VPS72Q15906 AL590640.2-201ENST00000457038 527 ntBASIC20.97■□□□□ 0.95
VPS72Q15906 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.97■□□□□ 0.95
VPS72Q15906 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.97■□□□□ 0.95
VPS72Q15906 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.97■□□□□ 0.95
VPS72Q15906 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS72Q15906 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.97■□□□□ 0.95
VPS72Q15906 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS72Q15906 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS72Q15906 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC20.97■□□□□ 0.95
VPS72Q15906 AP005019.2-201ENST00000615104 511 ntBASIC20.97■□□□□ 0.95
VPS72Q15906 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.97■□□□□ 0.95
VPS72Q15906 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VPS72Q15906 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
VPS72Q15906 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS72Q15906 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS72Q15906 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS72Q15906 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS72Q15906 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS72Q15906 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.97■□□□□ 0.95
VPS72Q15906 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
VPS72Q15906 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS72Q15906 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.96■□□□□ 0.95
VPS72Q15906 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.96■□□□□ 0.95
VPS72Q15906 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC20.96■□□□□ 0.95
VPS72Q15906 MIR769-201ENST00000390225 118 ntBASIC20.96■□□□□ 0.95
VPS72Q15906 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.96■□□□□ 0.95
VPS72Q15906 AC008267.1-201ENST00000474858 1069 ntBASIC20.96■□□□□ 0.95
VPS72Q15906 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC20.96■□□□□ 0.95
VPS72Q15906 AP001582.1-201ENST00000525856 295 ntBASIC20.96■□□□□ 0.95
VPS72Q15906 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.96■□□□□ 0.95
VPS72Q15906 AC018635.2-201ENST00000608625 364 ntBASIC20.96■□□□□ 0.95
VPS72Q15906 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.96■□□□□ 0.95
VPS72Q15906 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VPS72Q15906 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VPS72Q15906 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
VPS72Q15906 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS72Q15906 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS72Q15906 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS72Q15906 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS72Q15906 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS72Q15906 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS72Q15906 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS72Q15906 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VPS72Q15906 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS72Q15906 LBH-202ENST00000401506 485 ntTSL 3 BASIC20.95■□□□□ 0.94
VPS72Q15906 SPTLC1P5-201ENST00000450718 252 ntBASIC20.95■□□□□ 0.94
VPS72Q15906 COX5BP1-201ENST00000507622 393 ntBASIC20.95■□□□□ 0.94
VPS72Q15906 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC20.95■□□□□ 0.94
VPS72Q15906 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS72Q15906 MIR3907-201ENST00000579424 151 ntBASIC20.95■□□□□ 0.94
VPS72Q15906 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.95■□□□□ 0.94
VPS72Q15906 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VPS72Q15906 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS72Q15906 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS72Q15906 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS72Q15906 LINC01144-201ENST00000626198 1710 ntBASIC20.95■□□□□ 0.94
VPS72Q15906 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS72Q15906 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS72Q15906 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.95■□□□□ 0.94
VPS72Q15906 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms