Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
DDR1Q08345 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.99■□□□□ 0.79
DDR1Q08345 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
DDR1Q08345 GGT3P-204ENST00000453783 1664 ntBASIC19.99■□□□□ 0.79
DDR1Q08345 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
DDR1Q08345 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.98■□□□□ 0.79
DDR1Q08345 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.98■□□□□ 0.79
DDR1Q08345 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.98■□□□□ 0.79
DDR1Q08345 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
DDR1Q08345 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.98■□□□□ 0.79
DDR1Q08345 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 C1QBPP1-201ENST00000400117 770 ntBASIC19.98■□□□□ 0.79
DDR1Q08345 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.98■□□□□ 0.79
DDR1Q08345 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.98■□□□□ 0.79
DDR1Q08345 AC016694.1-201ENST00000434179 700 ntBASIC19.98■□□□□ 0.79
DDR1Q08345 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
DDR1Q08345 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
DDR1Q08345 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
DDR1Q08345 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.98■□□□□ 0.79
DDR1Q08345 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.98■□□□□ 0.79
DDR1Q08345 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.98■□□□□ 0.79
DDR1Q08345 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.98■□□□□ 0.79
DDR1Q08345 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.98■□□□□ 0.79
DDR1Q08345 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.98■□□□□ 0.79
DDR1Q08345 AC091271.1-201ENST00000611877 1162 ntBASIC19.98■□□□□ 0.79
DDR1Q08345 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.98■□□□□ 0.79
DDR1Q08345 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.98■□□□□ 0.79
DDR1Q08345 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
DDR1Q08345 LINC01144-201ENST00000626198 1710 ntBASIC19.98■□□□□ 0.79
DDR1Q08345 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
DDR1Q08345 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.98■□□□□ 0.79
DDR1Q08345 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.98■□□□□ 0.79
DDR1Q08345 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
DDR1Q08345 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 AC134312.5-201ENST00000568031 1313 ntBASIC19.98■□□□□ 0.79
DDR1Q08345 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
DDR1Q08345 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
DDR1Q08345 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.97■□□□□ 0.79
DDR1Q08345 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 AC009053.2-201ENST00000563701 2365 ntBASIC19.97■□□□□ 0.79
DDR1Q08345 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.97■□□□□ 0.79
DDR1Q08345 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.97■□□□□ 0.79
DDR1Q08345 AC006033.1-201ENST00000440505 426 ntBASIC19.97■□□□□ 0.79
DDR1Q08345 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.97■□□□□ 0.79
DDR1Q08345 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.97■□□□□ 0.79
DDR1Q08345 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.97■□□□□ 0.79
DDR1Q08345 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
DDR1Q08345 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.97■□□□□ 0.79
DDR1Q08345 DUX4L45-201ENST00000566406 1057 ntBASIC19.97■□□□□ 0.79
DDR1Q08345 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.97■□□□□ 0.79
DDR1Q08345 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 AC009486.1-201ENST00000569860 813 ntBASIC19.97■□□□□ 0.79
DDR1Q08345 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 AL118558.3-201ENST00000607414 1079 ntBASIC19.97■□□□□ 0.79
DDR1Q08345 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.97■□□□□ 0.79
DDR1Q08345 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.97■□□□□ 0.79
DDR1Q08345 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.97■□□□□ 0.79
DDR1Q08345 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
DDR1Q08345 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
DDR1Q08345 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.97■□□□□ 0.79
DDR1Q08345 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDR1Q08345 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.97■□□□□ 0.79
DDR1Q08345 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.96■□□□□ 0.79
DDR1Q08345 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.96■□□□□ 0.79
DDR1Q08345 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DDR1Q08345 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms