Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN12P56749 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 NCF1C-201ENST00000438382 1427 ntBASIC14.26□□□□□ -0.13
CLDN12P56749 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN12P56749 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 AC211429.1-201ENST00000415277 523 ntBASIC14.26□□□□□ -0.13
CLDN12P56749 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLDN12P56749 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN12P56749 PMS2P1-201ENST00000431037 1228 ntBASIC14.26□□□□□ -0.13
CLDN12P56749 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CLDN12P56749 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN12P56749 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN12P56749 CYP2A7P1-201ENST00000595391 815 ntBASIC14.26□□□□□ -0.13
CLDN12P56749 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.26□□□□□ -0.13
CLDN12P56749 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN12P56749 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN12P56749 SLC22A20-204ENST00000530038 1673 ntBASIC14.26□□□□□ -0.13
CLDN12P56749 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN12P56749 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLDN12P56749 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN12P56749 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN12P56749 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CLDN12P56749 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN12P56749 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN12P56749 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
CLDN12P56749 PAWRP1-201ENST00000451083 565 ntBASIC14.25□□□□□ -0.13
CLDN12P56749 AC087163.2-201ENST00000457299 853 ntBASIC14.25□□□□□ -0.13
CLDN12P56749 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.25□□□□□ -0.13
CLDN12P56749 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN12P56749 REXO1L3P-201ENST00000622202 1288 ntBASIC14.25□□□□□ -0.13
CLDN12P56749 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CLDN12P56749 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
CLDN12P56749 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLDN12P56749 AC099063.4-201ENST00000641099 1602 ntBASIC14.25□□□□□ -0.13
CLDN12P56749 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN12P56749 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.25□□□□□ -0.13
CLDN12P56749 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.25□□□□□ -0.13
CLDN12P56749 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
CLDN12P56749 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN12P56749 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN12P56749 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN12P56749 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms