Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 UBALD1-205ENST00000590891 2641 ntBASIC16.96■□□□□ 0.31
EPHB3P54753 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHB3P54753 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHB3P54753 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHB3P54753 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.96■□□□□ 0.31
EPHB3P54753 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.96■□□□□ 0.31
EPHB3P54753 COX5BP8-201ENST00000416911 349 ntBASIC16.96■□□□□ 0.31
EPHB3P54753 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.96■□□□□ 0.31
EPHB3P54753 KRT17P7-201ENST00000451704 1104 ntBASIC16.96■□□□□ 0.31
EPHB3P54753 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.96■□□□□ 0.31
EPHB3P54753 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.96■□□□□ 0.31
EPHB3P54753 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHB3P54753 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.96■□□□□ 0.31
EPHB3P54753 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
EPHB3P54753 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.96■□□□□ 0.31
EPHB3P54753 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.96■□□□□ 0.31
EPHB3P54753 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.96■□□□□ 0.31
EPHB3P54753 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.96■□□□□ 0.31
EPHB3P54753 AL109936.8-201ENST00000641772 604 ntBASIC16.96■□□□□ 0.31
EPHB3P54753 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHB3P54753 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHB3P54753 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
EPHB3P54753 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.96■□□□□ 0.31
EPHB3P54753 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
EPHB3P54753 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EPHB3P54753 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
EPHB3P54753 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.96■□□□□ 0.3
EPHB3P54753 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
EPHB3P54753 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
EPHB3P54753 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.96■□□□□ 0.3
EPHB3P54753 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.96■□□□□ 0.3
EPHB3P54753 CU639417.3-201ENST00000624240 1404 ntBASIC16.96■□□□□ 0.3
EPHB3P54753 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
EPHB3P54753 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.95■□□□□ 0.3
EPHB3P54753 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
EPHB3P54753 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 CYP4F24P-201ENST00000586049 1580 ntBASIC16.95■□□□□ 0.3
EPHB3P54753 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.95■□□□□ 0.3
EPHB3P54753 GK-202ENST00000378941 458 ntTSL 3 BASIC16.95■□□□□ 0.3
EPHB3P54753 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 FO393414.2-201ENST00000405153 598 ntBASIC16.95■□□□□ 0.3
EPHB3P54753 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.95■□□□□ 0.3
EPHB3P54753 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.95■□□□□ 0.3
EPHB3P54753 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.95■□□□□ 0.3
EPHB3P54753 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.95■□□□□ 0.3
EPHB3P54753 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.95■□□□□ 0.3
EPHB3P54753 AC004461.2-201ENST00000629517 803 ntBASIC16.95■□□□□ 0.3
EPHB3P54753 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.95■□□□□ 0.3
EPHB3P54753 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.95■□□□□ 0.3
EPHB3P54753 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.95■□□□□ 0.3
EPHB3P54753 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.95■□□□□ 0.3
EPHB3P54753 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.95■□□□□ 0.3
EPHB3P54753 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.95■□□□□ 0.3
EPHB3P54753 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
EPHB3P54753 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
EPHB3P54753 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.94■□□□□ 0.3
EPHB3P54753 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
EPHB3P54753 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 AL136982.4-201ENST00000437689 1740 ntBASIC16.94■□□□□ 0.3
EPHB3P54753 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 AC098614.1-201ENST00000368528 745 ntBASIC16.94■□□□□ 0.3
EPHB3P54753 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.94■□□□□ 0.3
EPHB3P54753 MEP1AP4-201ENST00000423244 1087 ntBASIC16.94■□□□□ 0.3
EPHB3P54753 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.94■□□□□ 0.3
EPHB3P54753 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.94■□□□□ 0.3
EPHB3P54753 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.94■□□□□ 0.3
EPHB3P54753 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.94■□□□□ 0.3
EPHB3P54753 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.94■□□□□ 0.3
EPHB3P54753 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.94■□□□□ 0.3
EPHB3P54753 SRD5A3P1-201ENST00000603021 949 ntBASIC16.94■□□□□ 0.3
EPHB3P54753 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.94■□□□□ 0.3
EPHB3P54753 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.94■□□□□ 0.3
EPHB3P54753 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
EPHB3P54753 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
EPHB3P54753 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms