Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLCN4P51793 AC074044.1-201ENST00000609673 707 ntBASIC17.07■□□□□ 0.32
CLCN4P51793 MIR6799-201ENST00000620297 69 ntBASIC17.07■□□□□ 0.32
CLCN4P51793 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN4P51793 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCN4P51793 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN4P51793 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN4P51793 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCN4P51793 AC006538.1-201ENST00000567905 1585 ntBASIC17.06■□□□□ 0.32
CLCN4P51793 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 AC106820.2-201ENST00000563775 3264 ntBASIC17.06■□□□□ 0.32
CLCN4P51793 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLCN4P51793 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CLCN4P51793 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCN4P51793 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLCN4P51793 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.06■□□□□ 0.32
CLCN4P51793 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCN4P51793 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLCN4P51793 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.06■□□□□ 0.32
CLCN4P51793 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN4P51793 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.06■□□□□ 0.32
CLCN4P51793 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CLCN4P51793 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN4P51793 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.06■□□□□ 0.32
CLCN4P51793 AC025048.3-201ENST00000590609 569 ntBASIC17.06■□□□□ 0.32
CLCN4P51793 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.06■□□□□ 0.32
CLCN4P51793 AC005702.4-201ENST00000618393 416 ntBASIC17.06■□□□□ 0.32
CLCN4P51793 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLCN4P51793 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN4P51793 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN4P51793 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 PCGF3-213ENST00000620529 1899 ntBASIC17.05■□□□□ 0.32
CLCN4P51793 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 AL603756.1-201ENST00000606511 2163 ntBASIC17.05■□□□□ 0.32
CLCN4P51793 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN4P51793 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN4P51793 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 TMEM14DP-201ENST00000422205 345 ntBASIC17.05■□□□□ 0.32
CLCN4P51793 HIST3H2BA-201ENST00000436555 524 ntBASIC17.05■□□□□ 0.32
CLCN4P51793 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN4P51793 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN4P51793 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.05■□□□□ 0.32
CLCN4P51793 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.05■□□□□ 0.32
CLCN4P51793 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.05■□□□□ 0.32
CLCN4P51793 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.05■□□□□ 0.32
CLCN4P51793 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN4P51793 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.05■□□□□ 0.32
CLCN4P51793 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.05■□□□□ 0.32
CLCN4P51793 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 WFDC1-204ENST00000613603 549 ntBASIC17.05■□□□□ 0.32
CLCN4P51793 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.05■□□□□ 0.32
CLCN4P51793 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN4P51793 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN4P51793 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLCN4P51793 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms