Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
CSNK1A1P48729 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSNK1A1P48729 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 CICP6-201ENST00000457191 2729 ntBASIC14.55□□□□□ -0.08
CSNK1A1P48729 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 AL355306.1-201ENST00000415580 579 ntBASIC14.55□□□□□ -0.08
CSNK1A1P48729 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 AL671277.1-201ENST00000429656 993 ntBASIC14.55□□□□□ -0.08
CSNK1A1P48729 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 AC093724.1-201ENST00000448659 1027 ntBASIC14.55□□□□□ -0.08
CSNK1A1P48729 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 FAM86C2P-203ENST00000528684 1004 ntBASIC14.55□□□□□ -0.08
CSNK1A1P48729 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CSNK1A1P48729 AC073439.1-201ENST00000624121 1774 ntBASIC14.55□□□□□ -0.08
CSNK1A1P48729 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSNK1A1P48729 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 AL596087.1-201ENST00000400979 1969 ntBASIC14.54□□□□□ -0.08
CSNK1A1P48729 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 AL513523.2-202ENST00000427283 2040 ntBASIC14.54□□□□□ -0.08
CSNK1A1P48729 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSNK1A1P48729 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.54□□□□□ -0.08
CSNK1A1P48729 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms