Protein–RNA interactions for Protein: P42574

CASP3, Caspase-3, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3P42574 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
CASP3P42574 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 AL009183.1-201ENST00000603760 355 ntBASIC15.33■□□□□ 0.04
CASP3P42574 GPALPP1-207ENST00000611650 899 ntBASIC15.33■□□□□ 0.04
CASP3P42574 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.33■□□□□ 0.04
CASP3P42574 AC139530.3-201ENST00000620344 690 ntBASIC15.33■□□□□ 0.04
CASP3P42574 AC055717.3-201ENST00000622967 595 ntBASIC15.33■□□□□ 0.04
CASP3P42574 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.33■□□□□ 0.04
CASP3P42574 AC092902.6-201ENST00000641783 218 ntBASIC15.33■□□□□ 0.04
CASP3P42574 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
CASP3P42574 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.33■□□□□ 0.04
CASP3P42574 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CASP3P42574 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.33■□□□□ 0.04
CASP3P42574 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CASP3P42574 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.33■□□□□ 0.04
CASP3P42574 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CASP3P42574 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.32■□□□□ 0.04
CASP3P42574 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CASP3P42574 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.32■□□□□ 0.04
CASP3P42574 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.32■□□□□ 0.04
CASP3P42574 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.32■□□□□ 0.04
CASP3P42574 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.32■□□□□ 0.04
CASP3P42574 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
CASP3P42574 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 MIR4469-201ENST00000583919 79 ntBASIC15.32■□□□□ 0.04
CASP3P42574 AL031055.1-201ENST00000606362 631 ntBASIC15.32■□□□□ 0.04
CASP3P42574 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CASP3P42574 ELL2P1-201ENST00000413990 1906 ntBASIC15.32■□□□□ 0.04
CASP3P42574 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.32■□□□□ 0.04
CASP3P42574 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CASP3P42574 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.32■□□□□ 0.04
CASP3P42574 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.32■□□□□ 0.04
CASP3P42574 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.32■□□□□ 0.04
CASP3P42574 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASP3P42574 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.32■□□□□ 0.04
CASP3P42574 FAM45BP-202ENST00000592932 1624 ntBASIC15.32■□□□□ 0.04
CASP3P42574 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.32■□□□□ 0.04
CASP3P42574 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CASP3P42574 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CASP3P42574 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.31■□□□□ 0.04
CASP3P42574 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 PMS2P4-201ENST00000412466 1052 ntBASIC15.31■□□□□ 0.04
CASP3P42574 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.31■□□□□ 0.04
CASP3P42574 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.31■□□□□ 0.04
CASP3P42574 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 CEND1P1-201ENST00000451006 455 ntBASIC15.31■□□□□ 0.04
CASP3P42574 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CASP3P42574 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.31■□□□□ 0.04
CASP3P42574 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.31■□□□□ 0.04
CASP3P42574 AC109635.5-201ENST00000533593 962 ntBASIC15.31■□□□□ 0.04
CASP3P42574 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.31■□□□□ 0.04
CASP3P42574 MIR3909-201ENST00000579518 119 ntBASIC15.31■□□□□ 0.04
CASP3P42574 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.31■□□□□ 0.04
CASP3P42574 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.31■□□□□ 0.04
CASP3P42574 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.31■□□□□ 0.04
CASP3P42574 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CASP3P42574 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.31■□□□□ 0.04
CASP3P42574 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASP3P42574 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms