Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC093458.2-201ENST00000623150 629 ntBASIC18.64■□□□□ 0.57
CLCN1P35523 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCN1P35523 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CLCN1P35523 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCN1P35523 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 AC020658.6-201ENST00000623564 1870 ntBASIC18.64■□□□□ 0.57
CLCN1P35523 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.64■□□□□ 0.57
CLCN1P35523 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCN1P35523 FRMD8P1-201ENST00000440433 1524 ntBASIC18.64■□□□□ 0.57
CLCN1P35523 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CLCN1P35523 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN1P35523 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLCN1P35523 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLCN1P35523 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLCN1P35523 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN1P35523 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLCN1P35523 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CLCN1P35523 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN1P35523 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLCN1P35523 SERPINA7P1-201ENST00000443077 631 ntBASIC18.63■□□□□ 0.57
CLCN1P35523 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.63■□□□□ 0.57
CLCN1P35523 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN1P35523 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.63■□□□□ 0.57
CLCN1P35523 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.63■□□□□ 0.57
CLCN1P35523 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLCN1P35523 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
CLCN1P35523 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLCN1P35523 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLCN1P35523 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCN1P35523 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLCN1P35523 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN1P35523 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCN1P35523 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CLCN1P35523 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.62■□□□□ 0.57
CLCN1P35523 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.62■□□□□ 0.57
CLCN1P35523 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.62■□□□□ 0.57
CLCN1P35523 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.62■□□□□ 0.57
CLCN1P35523 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLCN1P35523 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 POM121L3P-201ENST00000419331 1163 ntBASIC18.62■□□□□ 0.57
CLCN1P35523 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.62■□□□□ 0.57
CLCN1P35523 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.62■□□□□ 0.57
CLCN1P35523 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.62■□□□□ 0.57
CLCN1P35523 AC114341.1-201ENST00000618070 349 ntBASIC18.62■□□□□ 0.57
CLCN1P35523 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.62■□□□□ 0.57
CLCN1P35523 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.62■□□□□ 0.57
CLCN1P35523 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.62■□□□□ 0.57
CLCN1P35523 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 PMPCAP1-201ENST00000508114 1576 ntBASIC18.62■□□□□ 0.57
CLCN1P35523 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CLCN1P35523 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLCN1P35523 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.62■□□□□ 0.57
CLCN1P35523 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLCN1P35523 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.61■□□□□ 0.57
CLCN1P35523 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLCN1P35523 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.61■□□□□ 0.57
CLCN1P35523 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.61■□□□□ 0.57
CLCN1P35523 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms