Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CTNNA1P35221 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CTNNA1P35221 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNNA1P35221 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 LINC02447-202ENST00000501888 2146 ntBASIC17.29■□□□□ 0.36
CTNNA1P35221 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNNA1P35221 AC112504.1-201ENST00000623415 1841 ntBASIC17.29■□□□□ 0.36
CTNNA1P35221 AP002414.2-201ENST00000591780 3365 ntBASIC17.29■□□□□ 0.36
CTNNA1P35221 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 MRPL20P1-201ENST00000400819 433 ntBASIC17.29■□□□□ 0.36
CTNNA1P35221 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.29■□□□□ 0.36
CTNNA1P35221 HNRNPDP1-201ENST00000439535 754 ntBASIC17.29■□□□□ 0.36
CTNNA1P35221 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.29■□□□□ 0.36
CTNNA1P35221 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.29■□□□□ 0.36
CTNNA1P35221 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNNA1P35221 AC105339.3-201ENST00000560043 636 ntBASIC17.29■□□□□ 0.36
CTNNA1P35221 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.29■□□□□ 0.36
CTNNA1P35221 ACTL9-202ENST00000612068 1252 ntBASIC17.29■□□□□ 0.36
CTNNA1P35221 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CTNNA1P35221 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 AP002414.3-201ENST00000589352 1468 ntBASIC17.29■□□□□ 0.36
CTNNA1P35221 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.29■□□□□ 0.36
CTNNA1P35221 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.29■□□□□ 0.36
CTNNA1P35221 AC068587.6-202ENST00000641839 5619 ntBASIC17.29■□□□□ 0.36
CTNNA1P35221 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTNNA1P35221 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CTNNA1P35221 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTNNA1P35221 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CTNNA1P35221 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.28■□□□□ 0.36
CTNNA1P35221 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.28■□□□□ 0.36
CTNNA1P35221 AL592424.1-201ENST00000563624 1536 ntBASIC17.28■□□□□ 0.36
CTNNA1P35221 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.28■□□□□ 0.36
CTNNA1P35221 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CTNNA1P35221 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.28■□□□□ 0.36
CTNNA1P35221 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTNNA1P35221 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.28■□□□□ 0.36
CTNNA1P35221 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.28■□□□□ 0.36
CTNNA1P35221 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTNNA1P35221 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.28■□□□□ 0.36
CTNNA1P35221 UNC93B7-201ENST00000509439 705 ntBASIC17.28■□□□□ 0.36
CTNNA1P35221 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.28■□□□□ 0.36
CTNNA1P35221 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.28■□□□□ 0.36
CTNNA1P35221 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.28■□□□□ 0.36
CTNNA1P35221 AC012640.2-201ENST00000561606 901 ntBASIC17.28■□□□□ 0.36
CTNNA1P35221 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.28■□□□□ 0.36
CTNNA1P35221 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CTNNA1P35221 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CTNNA1P35221 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.28■□□□□ 0.36
CTNNA1P35221 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.28■□□□□ 0.36
CTNNA1P35221 AC073347.1-201ENST00000421633 2643 ntBASIC17.28■□□□□ 0.36
CTNNA1P35221 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.28■□□□□ 0.36
CTNNA1P35221 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTNNA1P35221 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CTNNA1P35221 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.27■□□□□ 0.36
CTNNA1P35221 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTNNA1P35221 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms