Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CHRNA3P32297 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHRNA3P32297 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA3P32297 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.25■□□□□ 0.35
CHRNA3P32297 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.25■□□□□ 0.35
CHRNA3P32297 FAM185BP-201ENST00000443595 716 ntBASIC17.25■□□□□ 0.35
CHRNA3P32297 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA3P32297 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.25■□□□□ 0.35
CHRNA3P32297 AC007064.4-201ENST00000637740 555 ntBASIC17.25■□□□□ 0.35
CHRNA3P32297 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRNA3P32297 AC126177.1-201ENST00000547829 2218 ntBASIC17.25■□□□□ 0.35
CHRNA3P32297 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CHRNA3P32297 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA3P32297 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHRNA3P32297 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA3P32297 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRNA3P32297 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRNA3P32297 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHRNA3P32297 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNA3P32297 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNA3P32297 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.24■□□□□ 0.35
CHRNA3P32297 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.24■□□□□ 0.35
CHRNA3P32297 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNA3P32297 AC023141.13-201ENST00000604991 943 ntBASIC17.24■□□□□ 0.35
CHRNA3P32297 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNA3P32297 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CHRNA3P32297 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 CDC14C-201ENST00000428251 1719 ntBASIC17.24■□□□□ 0.35
CHRNA3P32297 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.24■□□□□ 0.35
CHRNA3P32297 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRNA3P32297 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 AC129492.6-201ENST00000611383 1305 ntBASIC17.23■□□□□ 0.35
CHRNA3P32297 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA3P32297 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA3P32297 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 AC025580.3-201ENST00000617932 1424 ntBASIC17.23■□□□□ 0.35
CHRNA3P32297 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA3P32297 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNA3P32297 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.23■□□□□ 0.35
CHRNA3P32297 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.23■□□□□ 0.35
CHRNA3P32297 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNA3P32297 KRT19P2-202ENST00000557173 1012 ntBASIC17.23■□□□□ 0.35
CHRNA3P32297 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.23■□□□□ 0.35
CHRNA3P32297 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.23■□□□□ 0.35
CHRNA3P32297 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.23■□□□□ 0.35
CHRNA3P32297 CYP2A7P1-201ENST00000595391 815 ntBASIC17.23■□□□□ 0.35
CHRNA3P32297 AC055717.3-201ENST00000622967 595 ntBASIC17.23■□□□□ 0.35
CHRNA3P32297 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CHRNA3P32297 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 LINC02447-202ENST00000501888 2146 ntBASIC17.23■□□□□ 0.35
CHRNA3P32297 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHRNA3P32297 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms