Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
PTPN6P29350 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PTPN6P29350 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PTPN6P29350 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN6P29350 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PTPN6P29350 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.51■□□□□ 0.07
PTPN6P29350 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN6P29350 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.51■□□□□ 0.07
PTPN6P29350 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN6P29350 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN6P29350 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.51■□□□□ 0.07
PTPN6P29350 AC040169.1-201ENST00000565382 521 ntBASIC15.51■□□□□ 0.07
PTPN6P29350 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.51■□□□□ 0.07
PTPN6P29350 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.51■□□□□ 0.07
PTPN6P29350 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.51■□□□□ 0.07
PTPN6P29350 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.51■□□□□ 0.07
PTPN6P29350 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.51■□□□□ 0.07
PTPN6P29350 AC023511.2-201ENST00000618803 211 ntBASIC15.51■□□□□ 0.07
PTPN6P29350 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PTPN6P29350 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
PTPN6P29350 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
PTPN6P29350 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PTPN6P29350 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.5■□□□□ 0.07
PTPN6P29350 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PTPN6P29350 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PTPN6P29350 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PTPN6P29350 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PTPN6P29350 RNU1-129P-201ENST00000384064 167 ntBASIC15.5■□□□□ 0.07
PTPN6P29350 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PTPN6P29350 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.5■□□□□ 0.07
PTPN6P29350 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.5■□□□□ 0.07
PTPN6P29350 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.5■□□□□ 0.07
PTPN6P29350 U1.21-201ENST00000580816 167 ntBASIC15.5■□□□□ 0.07
PTPN6P29350 MIR4515-201ENST00000584082 81 ntBASIC15.5■□□□□ 0.07
PTPN6P29350 AC010507.1-201ENST00000633895 436 ntBASIC15.5■□□□□ 0.07
PTPN6P29350 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.5■□□□□ 0.07
PTPN6P29350 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PTPN6P29350 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.5■□□□□ 0.07
PTPN6P29350 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.5■□□□□ 0.07
PTPN6P29350 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PTPN6P29350 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PTPN6P29350 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 AC022532.1-201ENST00000624563 1728 ntBASIC15.49■□□□□ 0.07
PTPN6P29350 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.49■□□□□ 0.07
PTPN6P29350 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.49■□□□□ 0.07
PTPN6P29350 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN6P29350 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN6P29350 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN6P29350 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PTPN6P29350 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 HMGA1P7-201ENST00000406908 502 ntBASIC15.49■□□□□ 0.07
PTPN6P29350 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN6P29350 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN6P29350 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.49■□□□□ 0.07
PTPN6P29350 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.49■□□□□ 0.07
PTPN6P29350 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.49■□□□□ 0.07
PTPN6P29350 AC096734.2-201ENST00000562054 433 ntBASIC15.49■□□□□ 0.07
PTPN6P29350 AC018845.2-201ENST00000568326 409 ntBASIC15.49■□□□□ 0.07
PTPN6P29350 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.49■□□□□ 0.07
PTPN6P29350 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.49■□□□□ 0.07
PTPN6P29350 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PTPN6P29350 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.49■□□□□ 0.07
PTPN6P29350 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms