Protein–RNA interactions for Protein: P24390

KDELR1, ER lumen protein-retaining receptor 1, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR1P24390 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 PMS2P7-201ENST00000506558 1336 ntBASIC16.91■□□□□ 0.3
KDELR1P24390 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
KDELR1P24390 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.91■□□□□ 0.3
KDELR1P24390 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR1P24390 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
KDELR1P24390 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
KDELR1P24390 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.9■□□□□ 0.3
KDELR1P24390 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.9■□□□□ 0.3
KDELR1P24390 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.9■□□□□ 0.3
KDELR1P24390 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
KDELR1P24390 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KDELR1P24390 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.9■□□□□ 0.3
KDELR1P24390 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.9■□□□□ 0.3
KDELR1P24390 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.9■□□□□ 0.3
KDELR1P24390 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.9■□□□□ 0.3
KDELR1P24390 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 AL138918.1-201ENST00000568306 659 ntBASIC16.9■□□□□ 0.3
KDELR1P24390 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.9■□□□□ 0.3
KDELR1P24390 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.9■□□□□ 0.3
KDELR1P24390 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.9■□□□□ 0.3
KDELR1P24390 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.9■□□□□ 0.3
KDELR1P24390 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.9■□□□□ 0.3
KDELR1P24390 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KDELR1P24390 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.9■□□□□ 0.3
KDELR1P24390 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.9■□□□□ 0.3
KDELR1P24390 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
KDELR1P24390 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
KDELR1P24390 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR1P24390 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
KDELR1P24390 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.89■□□□□ 0.3
KDELR1P24390 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KDELR1P24390 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KDELR1P24390 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.89■□□□□ 0.3
KDELR1P24390 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.89■□□□□ 0.3
KDELR1P24390 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KDELR1P24390 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.89■□□□□ 0.29
KDELR1P24390 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.89■□□□□ 0.29
KDELR1P24390 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
KDELR1P24390 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 HAUS4P1-201ENST00000406739 1145 ntBASIC16.89■□□□□ 0.29
KDELR1P24390 AC023274.1-201ENST00000418278 595 ntBASIC16.89■□□□□ 0.29
KDELR1P24390 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
KDELR1P24390 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.89■□□□□ 0.29
KDELR1P24390 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.89■□□□□ 0.29
KDELR1P24390 RARRES2P8-201ENST00000566335 367 ntBASIC16.89■□□□□ 0.29
KDELR1P24390 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.89■□□□□ 0.29
KDELR1P24390 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.89■□□□□ 0.29
KDELR1P24390 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
KDELR1P24390 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR1P24390 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
KDELR1P24390 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
KDELR1P24390 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDELR1P24390 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDELR1P24390 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
KDELR1P24390 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.88■□□□□ 0.29
KDELR1P24390 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms