Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3BP20337 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3BP20337 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3BP20337 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3BP20337 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3BP20337 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB3BP20337 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB3BP20337 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.36□□□□□ -0.11
RAB3BP20337 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3BP20337 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.36□□□□□ -0.11
RAB3BP20337 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3BP20337 NTF6B-201ENST00000591913 560 ntBASIC14.36□□□□□ -0.11
RAB3BP20337 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.36□□□□□ -0.11
RAB3BP20337 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB3BP20337 AC006011.2-201ENST00000621313 1158 ntBASIC14.36□□□□□ -0.11
RAB3BP20337 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3BP20337 AL009178.2-201ENST00000597278 2719 ntBASIC14.36□□□□□ -0.11
RAB3BP20337 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.36□□□□□ -0.11
RAB3BP20337 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAB3BP20337 AC079776.2-201ENST00000641154 1609 ntBASIC14.36□□□□□ -0.11
RAB3BP20337 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB3BP20337 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RAB3BP20337 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
RAB3BP20337 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3BP20337 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB3BP20337 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB3BP20337 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB3BP20337 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB3BP20337 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 AL592424.1-201ENST00000563624 1536 ntBASIC14.36□□□□□ -0.11
RAB3BP20337 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB3BP20337 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
RAB3BP20337 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAB3BP20337 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB3BP20337 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB3BP20337 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB3BP20337 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB3BP20337 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
RAB3BP20337 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RAB3BP20337 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 OR2I1P-210ENST00000642037 4691 ntBASIC14.35□□□□□ -0.11
RAB3BP20337 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB3BP20337 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB3BP20337 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RAB3BP20337 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB3BP20337 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB3BP20337 CHCHD2P8-201ENST00000429873 447 ntBASIC14.35□□□□□ -0.11
RAB3BP20337 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB3BP20337 BNIP3P18-201ENST00000593976 575 ntBASIC14.35□□□□□ -0.11
RAB3BP20337 CYP2A7P1-201ENST00000595391 815 ntBASIC14.35□□□□□ -0.11
RAB3BP20337 Z69720.1-201ENST00000601483 472 ntBASIC14.35□□□□□ -0.11
RAB3BP20337 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB3BP20337 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB3BP20337 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB3BP20337 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RAB3BP20337 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RAB3BP20337 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB3BP20337 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB3BP20337 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB3BP20337 AC233702.3-201ENST00000578656 1387 ntBASIC14.34□□□□□ -0.11
RAB3BP20337 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB3BP20337 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB3BP20337 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RAB3BP20337 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB3BP20337 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB3BP20337 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB3BP20337 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RAB3BP20337 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms