Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.61■□□□□ 0.25
NFKB1P19838 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
NFKB1P19838 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NFKB1P19838 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NFKB1P19838 AL589702.1-201ENST00000641229 1509 ntBASIC16.6■□□□□ 0.25
NFKB1P19838 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.6■□□□□ 0.25
NFKB1P19838 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.6■□□□□ 0.25
NFKB1P19838 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.6■□□□□ 0.25
NFKB1P19838 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NFKB1P19838 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 MIR648-201ENST00000385046 94 ntBASIC16.6■□□□□ 0.25
NFKB1P19838 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.6■□□□□ 0.25
NFKB1P19838 TFAMP1-201ENST00000412727 736 ntBASIC16.6■□□□□ 0.25
NFKB1P19838 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.6■□□□□ 0.25
NFKB1P19838 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.6■□□□□ 0.25
NFKB1P19838 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.6■□□□□ 0.25
NFKB1P19838 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.6■□□□□ 0.25
NFKB1P19838 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 AKAP8P1-201ENST00000434743 1349 ntBASIC16.6■□□□□ 0.25
NFKB1P19838 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
NFKB1P19838 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.6■□□□□ 0.25
NFKB1P19838 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.6■□□□□ 0.25
NFKB1P19838 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NFKB1P19838 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NFKB1P19838 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NFKB1P19838 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NFKB1P19838 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.59■□□□□ 0.25
NFKB1P19838 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.59■□□□□ 0.25
NFKB1P19838 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 CDC14C-201ENST00000428251 1719 ntBASIC16.59■□□□□ 0.25
NFKB1P19838 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NFKB1P19838 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.59■□□□□ 0.25
NFKB1P19838 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.59■□□□□ 0.25
NFKB1P19838 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.59■□□□□ 0.25
NFKB1P19838 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.59■□□□□ 0.25
NFKB1P19838 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.59■□□□□ 0.25
NFKB1P19838 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.59■□□□□ 0.25
NFKB1P19838 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.59■□□□□ 0.25
NFKB1P19838 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.59■□□□□ 0.25
NFKB1P19838 C20orf181-201ENST00000623918 480 ntBASIC16.59■□□□□ 0.25
NFKB1P19838 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NFKB1P19838 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
NFKB1P19838 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NFKB1P19838 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NFKB1P19838 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms