Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 U82695.1-201ENST00000635752 1889 ntBASIC17.72■□□□□ 0.43
CCDC172P0C7W6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 AC067930.6-201ENST00000623257 4947 ntBASIC17.72■□□□□ 0.43
CCDC172P0C7W6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 RNU1-129P-201ENST00000384064 167 ntBASIC17.72■□□□□ 0.43
CCDC172P0C7W6 AC108751.1-201ENST00000490852 363 ntBASIC17.72■□□□□ 0.43
CCDC172P0C7W6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 U1.21-201ENST00000580816 167 ntBASIC17.72■□□□□ 0.43
CCDC172P0C7W6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC172P0C7W6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 AL513480.1-201ENST00000451731 511 ntBASIC17.71■□□□□ 0.43
CCDC172P0C7W6 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 AL160237.2-201ENST00000556165 472 ntBASIC17.71■□□□□ 0.43
CCDC172P0C7W6 RN7SL510P-201ENST00000581311 263 ntBASIC17.71■□□□□ 0.43
CCDC172P0C7W6 AL031055.1-201ENST00000606362 631 ntBASIC17.71■□□□□ 0.43
CCDC172P0C7W6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 AC148477.8-201ENST00000624298 468 ntBASIC17.71■□□□□ 0.43
CCDC172P0C7W6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC172P0C7W6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC172P0C7W6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.71■□□□□ 0.42
CCDC172P0C7W6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCDC172P0C7W6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.71■□□□□ 0.42
CCDC172P0C7W6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CCDC172P0C7W6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 AC005622.1-201ENST00000636801 1703 ntBASIC17.7■□□□□ 0.42
CCDC172P0C7W6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 AC104581.4-201ENST00000623126 3052 ntBASIC17.7■□□□□ 0.42
CCDC172P0C7W6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
CCDC172P0C7W6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms