Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC003101.2-201ENST00000612557 442 ntBASIC14.8□□□□□ -0.04
FREM3P0C091 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
FREM3P0C091 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.8□□□□□ -0.04
FREM3P0C091 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
FREM3P0C091 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
FREM3P0C091 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
FREM3P0C091 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
FREM3P0C091 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
FREM3P0C091 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.8□□□□□ -0.04
FREM3P0C091 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.8□□□□□ -0.04
FREM3P0C091 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.8□□□□□ -0.04
FREM3P0C091 IGHV3-62-201ENST00000520057 340 ntBASIC14.8□□□□□ -0.04
FREM3P0C091 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.8□□□□□ -0.04
FREM3P0C091 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.8□□□□□ -0.04
FREM3P0C091 AC020765.3-201ENST00000613051 740 ntBASIC14.8□□□□□ -0.04
FREM3P0C091 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
FREM3P0C091 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
FREM3P0C091 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FREM3P0C091 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.79□□□□□ -0.04
FREM3P0C091 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
FREM3P0C091 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.79□□□□□ -0.04
FREM3P0C091 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.79□□□□□ -0.04
FREM3P0C091 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
FREM3P0C091 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.79□□□□□ -0.04
FREM3P0C091 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.79□□□□□ -0.04
FREM3P0C091 CYP2T1P-202ENST00000641596 2535 ntBASIC14.79□□□□□ -0.04
FREM3P0C091 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.79□□□□□ -0.04
FREM3P0C091 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 AL080243.2-201ENST00000418783 582 ntBASIC14.79□□□□□ -0.04
FREM3P0C091 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.79□□□□□ -0.04
FREM3P0C091 TSPY16P-201ENST00000449843 468 ntBASIC14.79□□□□□ -0.04
FREM3P0C091 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.79□□□□□ -0.04
FREM3P0C091 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.79□□□□□ -0.04
FREM3P0C091 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.79□□□□□ -0.04
FREM3P0C091 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.79□□□□□ -0.04
FREM3P0C091 AL390955.2-201ENST00000603032 514 ntBASIC14.79□□□□□ -0.04
FREM3P0C091 AC004840.1-201ENST00000636359 365 ntBASIC14.79□□□□□ -0.04
FREM3P0C091 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
FREM3P0C091 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
FREM3P0C091 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.79□□□□□ -0.04
FREM3P0C091 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.79□□□□□ -0.04
FREM3P0C091 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.79□□□□□ -0.04
FREM3P0C091 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
FREM3P0C091 TUBB3P1-201ENST00000405796 1332 ntBASIC14.79□□□□□ -0.04
FREM3P0C091 AC005622.1-201ENST00000636801 1703 ntBASIC14.79□□□□□ -0.04
FREM3P0C091 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FREM3P0C091 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
FREM3P0C091 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
FREM3P0C091 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 HLA-H-201ENST00000383620 1096 ntBASIC14.78□□□□□ -0.04
FREM3P0C091 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 AL035633.1-201ENST00000406139 838 ntBASIC14.78□□□□□ -0.04
FREM3P0C091 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.78□□□□□ -0.04
FREM3P0C091 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.78□□□□□ -0.04
FREM3P0C091 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.78□□□□□ -0.04
FREM3P0C091 AL512356.2-201ENST00000546955 174 ntBASIC14.78□□□□□ -0.04
FREM3P0C091 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.78□□□□□ -0.04
FREM3P0C091 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.78□□□□□ -0.04
FREM3P0C091 AC006538.1-201ENST00000567905 1585 ntBASIC14.78□□□□□ -0.04
FREM3P0C091 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.78□□□□□ -0.04
FREM3P0C091 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 AL391005.1-201ENST00000623953 2435 ntBASIC14.78□□□□□ -0.04
FREM3P0C091 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FREM3P0C091 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms