Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TPM2P07951 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TPM2P07951 AC010491.1-201ENST00000563101 2797 ntBASIC18.66■□□□□ 0.58
TPM2P07951 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TPM2P07951 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TPM2P07951 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.66■□□□□ 0.58
TPM2P07951 IGHV3-47-201ENST00000425060 335 ntBASIC18.66■□□□□ 0.58
TPM2P07951 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 AP002383.4-201ENST00000442518 975 ntBASIC18.66■□□□□ 0.58
TPM2P07951 AP000867.3-201ENST00000524675 377 ntBASIC18.66■□□□□ 0.58
TPM2P07951 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.66■□□□□ 0.58
TPM2P07951 AC092329.2-201ENST00000598402 547 ntBASIC18.66■□□□□ 0.58
TPM2P07951 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.66■□□□□ 0.58
TPM2P07951 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.66■□□□□ 0.58
TPM2P07951 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.66■□□□□ 0.58
TPM2P07951 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.66■□□□□ 0.58
TPM2P07951 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.66■□□□□ 0.58
TPM2P07951 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TPM2P07951 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 SIGLEC16-201ENST00000599858 1437 ntBASIC18.66■□□□□ 0.58
TPM2P07951 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TPM2P07951 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 AL645728.1-201ENST00000366221 2101 ntBASIC18.65■□□□□ 0.58
TPM2P07951 AC004817.3-201ENST00000602957 2129 ntBASIC18.65■□□□□ 0.58
TPM2P07951 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.65■□□□□ 0.58
TPM2P07951 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.65■□□□□ 0.58
TPM2P07951 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM2P07951 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TPM2P07951 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TPM2P07951 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TPM2P07951 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TPM2P07951 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TPM2P07951 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TPM2P07951 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM2P07951 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.65■□□□□ 0.58
TPM2P07951 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TPM2P07951 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TPM2P07951 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.65■□□□□ 0.58
TPM2P07951 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.65■□□□□ 0.58
TPM2P07951 AL590326.2-201ENST00000625139 305 ntBASIC18.65■□□□□ 0.58
TPM2P07951 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TPM2P07951 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TPM2P07951 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TPM2P07951 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.65■□□□□ 0.58
TPM2P07951 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.64■□□□□ 0.58
TPM2P07951 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.64■□□□□ 0.58
TPM2P07951 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TPM2P07951 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TPM2P07951 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
TPM2P07951 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TPM2P07951 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.64■□□□□ 0.57
TPM2P07951 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.64■□□□□ 0.57
TPM2P07951 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.64■□□□□ 0.57
TPM2P07951 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TPM2P07951 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TPM2P07951 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TPM2P07951 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.64■□□□□ 0.57
TPM2P07951 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
TPM2P07951 LINC00982-205ENST00000420957 435 ntBASIC18.64■□□□□ 0.57
TPM2P07951 ABCD1P5-201ENST00000445663 754 ntBASIC18.64■□□□□ 0.57
TPM2P07951 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.64■□□□□ 0.57
TPM2P07951 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.64■□□□□ 0.57
TPM2P07951 AC012615.1-201ENST00000565797 1299 ntBASIC18.64■□□□□ 0.57
TPM2P07951 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms