Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV3P03979 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV3P03979 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV3P03979 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV3P03979 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
TRGV3P03979 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 MIR1233-2-201ENST00000408138 82 ntBASIC12.88□□□□□ -0.35
TRGV3P03979 MIR1233-1-201ENST00000408722 82 ntBASIC12.88□□□□□ -0.35
TRGV3P03979 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.88□□□□□ -0.35
TRGV3P03979 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 MIR4469-201ENST00000583919 79 ntBASIC12.88□□□□□ -0.35
TRGV3P03979 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.88□□□□□ -0.35
TRGV3P03979 AC026120.1-201ENST00000611536 926 ntBASIC12.88□□□□□ -0.35
TRGV3P03979 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRGV3P03979 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV3P03979 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV3P03979 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV3P03979 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV3P03979 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.87□□□□□ -0.35
TRGV3P03979 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TRGV3P03979 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRGV3P03979 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRGV3P03979 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.87□□□□□ -0.35
TRGV3P03979 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.87□□□□□ -0.35
TRGV3P03979 AC211486.1-202ENST00000416371 468 ntBASIC12.87□□□□□ -0.35
TRGV3P03979 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.87□□□□□ -0.35
TRGV3P03979 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms