Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TRBC1P01850 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBC1P01850 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.33■□□□□ 0.2
TRBC1P01850 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRBC1P01850 AC004449.1-201ENST00000564240 433 ntBASIC16.33■□□□□ 0.2
TRBC1P01850 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.33■□□□□ 0.2
TRBC1P01850 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBC1P01850 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 AC018529.1-201ENST00000613063 361 ntBASIC16.33■□□□□ 0.2
TRBC1P01850 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBC1P01850 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBC1P01850 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRBC1P01850 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRBC1P01850 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBC1P01850 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBC1P01850 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
TRBC1P01850 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRBC1P01850 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBC1P01850 FER1L4-210ENST00000615531 5998 ntBASIC16.33■□□□□ 0.2
TRBC1P01850 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRBC1P01850 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.33■□□□□ 0.2
TRBC1P01850 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 PCDH8P1-201ENST00000428983 2773 ntBASIC16.32■□□□□ 0.2
TRBC1P01850 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRBC1P01850 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.32■□□□□ 0.2
TRBC1P01850 SPDYE7P-202ENST00000420373 878 ntBASIC16.32■□□□□ 0.2
TRBC1P01850 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBC1P01850 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBC1P01850 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 AC069262.1-201ENST00000539058 672 ntBASIC16.32■□□□□ 0.2
TRBC1P01850 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBC1P01850 AC025678.2-201ENST00000562061 970 ntBASIC16.32■□□□□ 0.2
TRBC1P01850 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRBC1P01850 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRBC1P01850 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRBC1P01850 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBC1P01850 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBC1P01850 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBC1P01850 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRBC1P01850 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBC1P01850 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBC1P01850 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBC1P01850 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBC1P01850 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRBC1P01850 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBC1P01850 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBC1P01850 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRBC1P01850 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBC1P01850 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBC1P01850 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.31■□□□□ 0.2
TRBC1P01850 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.31■□□□□ 0.2
TRBC1P01850 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.31■□□□□ 0.2
TRBC1P01850 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBC1P01850 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.31■□□□□ 0.2
TRBC1P01850 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.31■□□□□ 0.2
TRBC1P01850 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.31■□□□□ 0.2
TRBC1P01850 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.31■□□□□ 0.2
TRBC1P01850 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBC1P01850 MIR6080-201ENST00000617359 66 ntBASIC16.31■□□□□ 0.2
TRBC1P01850 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBC1P01850 AC093028.1-201ENST00000622998 982 ntBASIC16.31■□□□□ 0.2
TRBC1P01850 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms