Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
IFNA1P01562 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.97□□□□□ -0.33
IFNA1P01562 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.97□□□□□ -0.33
IFNA1P01562 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.97□□□□□ -0.33
IFNA1P01562 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.97□□□□□ -0.33
IFNA1P01562 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 AC006058.3-201ENST00000606217 1069 ntBASIC12.97□□□□□ -0.33
IFNA1P01562 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.97□□□□□ -0.33
IFNA1P01562 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 CICP24-201ENST00000605464 2705 ntBASIC12.97□□□□□ -0.33
IFNA1P01562 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.97□□□□□ -0.33
IFNA1P01562 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.97□□□□□ -0.33
IFNA1P01562 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
IFNA1P01562 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
IFNA1P01562 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.97□□□□□ -0.33
IFNA1P01562 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.96□□□□□ -0.33
IFNA1P01562 AL671710.1-201ENST00000610245 2349 ntBASIC12.96□□□□□ -0.33
IFNA1P01562 AL359258.3-201ENST00000622910 2331 ntBASIC12.96□□□□□ -0.33
IFNA1P01562 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFNA1P01562 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFNA1P01562 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.96□□□□□ -0.33
IFNA1P01562 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFNA1P01562 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.96□□□□□ -0.33
IFNA1P01562 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.96□□□□□ -0.33
IFNA1P01562 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFNA1P01562 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.96□□□□□ -0.33
IFNA1P01562 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
IFNA1P01562 AC092919.2-201ENST00000623631 1645 ntBASIC12.96□□□□□ -0.33
IFNA1P01562 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
IFNA1P01562 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFNA1P01562 PCGF3-213ENST00000620529 1899 ntBASIC12.96□□□□□ -0.33
IFNA1P01562 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.96□□□□□ -0.33
IFNA1P01562 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFNA1P01562 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFNA1P01562 UNC93B2-201ENST00000285383 730 ntBASIC12.96□□□□□ -0.33
IFNA1P01562 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.96□□□□□ -0.33
IFNA1P01562 KLF4P1-201ENST00000412782 1185 ntBASIC12.96□□□□□ -0.33
IFNA1P01562 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.96□□□□□ -0.33
IFNA1P01562 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.96□□□□□ -0.33
IFNA1P01562 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.96□□□□□ -0.33
IFNA1P01562 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.96□□□□□ -0.33
IFNA1P01562 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFNA1P01562 AL391807.1-203ENST00000604392 2365 ntBASIC12.96□□□□□ -0.33
IFNA1P01562 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
IFNA1P01562 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IFNA1P01562 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.96□□□□□ -0.34
IFNA1P01562 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
IFNA1P01562 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
IFNA1P01562 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IFNA1P01562 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IFNA1P01562 AC106881.1-201ENST00000605849 3329 ntBASIC12.96□□□□□ -0.34
IFNA1P01562 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.96□□□□□ -0.34
IFNA1P01562 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
IFNA1P01562 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
IFNA1P01562 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IFNA1P01562 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
IFNA1P01562 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IFNA1P01562 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
IFNA1P01562 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
IFNA1P01562 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.95□□□□□ -0.34
IFNA1P01562 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.95□□□□□ -0.34
IFNA1P01562 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
IFNA1P01562 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
IFNA1P01562 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.95□□□□□ -0.34
IFNA1P01562 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.95□□□□□ -0.34
IFNA1P01562 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms