Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
LTAP01374 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 IGHV3-47-201ENST00000425060 335 ntBASIC12.33□□□□□ -0.44
LTAP01374 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.33□□□□□ -0.44
LTAP01374 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.33□□□□□ -0.44
LTAP01374 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.33□□□□□ -0.44
LTAP01374 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.33□□□□□ -0.44
LTAP01374 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.33□□□□□ -0.44
LTAP01374 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
LTAP01374 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LTAP01374 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.33□□□□□ -0.44
LTAP01374 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
LTAP01374 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 AP003680.1-201ENST00000598970 3660 ntBASIC12.33□□□□□ -0.44
LTAP01374 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.33□□□□□ -0.44
LTAP01374 KRT18P1-202ENST00000452408 1331 ntBASIC12.33□□□□□ -0.44
LTAP01374 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
LTAP01374 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.33□□□□□ -0.44
LTAP01374 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LTAP01374 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LTAP01374 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.32□□□□□ -0.44
LTAP01374 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 AC016734.2-201ENST00000624325 1377 ntBASIC12.32□□□□□ -0.44
LTAP01374 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.32□□□□□ -0.44
LTAP01374 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.32□□□□□ -0.44
LTAP01374 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.32□□□□□ -0.44
LTAP01374 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.32□□□□□ -0.44
LTAP01374 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.32□□□□□ -0.44
LTAP01374 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.32□□□□□ -0.44
LTAP01374 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
LTAP01374 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.32□□□□□ -0.44
LTAP01374 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.32□□□□□ -0.44
LTAP01374 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.32□□□□□ -0.44
LTAP01374 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.32□□□□□ -0.44
LTAP01374 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 CICP24-201ENST00000605464 2705 ntBASIC12.32□□□□□ -0.44
LTAP01374 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LTAP01374 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.32□□□□□ -0.44
LTAP01374 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.32□□□□□ -0.44
LTAP01374 LINC01101-201ENST00000622953 1884 ntBASIC12.31□□□□□ -0.44
LTAP01374 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.31□□□□□ -0.44
LTAP01374 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LTAP01374 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms