Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ZNF253O75346 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 AP002383.4-201ENST00000442518 975 ntBASIC12.8□□□□□ -0.36
ZNF253O75346 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.8□□□□□ -0.36
ZNF253O75346 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 AP002414.4-201ENST00000589764 1148 ntBASIC12.8□□□□□ -0.36
ZNF253O75346 IL11-204ENST00000590625 1028 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.8□□□□□ -0.36
ZNF253O75346 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 ST20-AS1-201ENST00000560255 4223 ntBASIC12.8□□□□□ -0.36
ZNF253O75346 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.8□□□□□ -0.36
ZNF253O75346 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.8□□□□□ -0.36
ZNF253O75346 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.8□□□□□ -0.36
ZNF253O75346 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
ZNF253O75346 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZNF253O75346 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 NCF1C-201ENST00000438382 1427 ntBASIC12.79□□□□□ -0.36
ZNF253O75346 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 AC126335.2-201ENST00000623362 4637 ntBASIC12.79□□□□□ -0.36
ZNF253O75346 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ZNF253O75346 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ZNF253O75346 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF253O75346 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 CICP4-201ENST00000447359 2812 ntBASIC12.79□□□□□ -0.36
ZNF253O75346 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ZNF253O75346 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ZNF253O75346 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ZNF253O75346 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 LINC00265-3P-201ENST00000447588 903 ntBASIC12.79□□□□□ -0.36
ZNF253O75346 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ZNF253O75346 AC104819.1-201ENST00000504587 486 ntBASIC12.79□□□□□ -0.36
ZNF253O75346 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF253O75346 AC012615.1-201ENST00000565797 1299 ntBASIC12.79□□□□□ -0.36
ZNF253O75346 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.79□□□□□ -0.36
ZNF253O75346 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
ZNF253O75346 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.79□□□□□ -0.36
ZNF253O75346 AL590326.2-201ENST00000625139 305 ntBASIC12.79□□□□□ -0.36
ZNF253O75346 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.79□□□□□ -0.36
ZNF253O75346 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ZNF253O75346 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms