Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.66■□□□□ 0.42
EXTL3O43909 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
EXTL3O43909 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
EXTL3O43909 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 MIR648-201ENST00000385046 94 ntBASIC17.66■□□□□ 0.42
EXTL3O43909 SPDYE7P-202ENST00000420373 878 ntBASIC17.66■□□□□ 0.42
EXTL3O43909 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.66■□□□□ 0.42
EXTL3O43909 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.66■□□□□ 0.42
EXTL3O43909 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.66■□□□□ 0.42
EXTL3O43909 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.66■□□□□ 0.42
EXTL3O43909 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 AC069262.1-201ENST00000539058 672 ntBASIC17.66■□□□□ 0.42
EXTL3O43909 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
EXTL3O43909 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EXTL3O43909 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.66■□□□□ 0.42
EXTL3O43909 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.66■□□□□ 0.42
EXTL3O43909 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EXTL3O43909 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXTL3O43909 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.65■□□□□ 0.42
EXTL3O43909 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
EXTL3O43909 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.65■□□□□ 0.42
EXTL3O43909 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EXTL3O43909 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
EXTL3O43909 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.65■□□□□ 0.42
EXTL3O43909 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.65■□□□□ 0.42
EXTL3O43909 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.65■□□□□ 0.42
EXTL3O43909 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.65■□□□□ 0.42
EXTL3O43909 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.65■□□□□ 0.42
EXTL3O43909 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.65■□□□□ 0.42
EXTL3O43909 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.65■□□□□ 0.42
EXTL3O43909 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.65■□□□□ 0.42
EXTL3O43909 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.65■□□□□ 0.42
EXTL3O43909 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.65■□□□□ 0.42
EXTL3O43909 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.65■□□□□ 0.42
EXTL3O43909 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
EXTL3O43909 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EXTL3O43909 AC025678.2-201ENST00000562061 970 ntBASIC17.65■□□□□ 0.42
EXTL3O43909 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.65■□□□□ 0.42
EXTL3O43909 AC004449.1-201ENST00000564240 433 ntBASIC17.65■□□□□ 0.42
EXTL3O43909 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 MIR6080-201ENST00000617359 66 ntBASIC17.65■□□□□ 0.42
EXTL3O43909 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.65■□□□□ 0.42
EXTL3O43909 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
EXTL3O43909 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXTL3O43909 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
EXTL3O43909 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
EXTL3O43909 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
EXTL3O43909 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
EXTL3O43909 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.64■□□□□ 0.41
EXTL3O43909 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
EXTL3O43909 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.64■□□□□ 0.41
EXTL3O43909 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
EXTL3O43909 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
EXTL3O43909 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.64■□□□□ 0.41
EXTL3O43909 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXTL3O43909 AL353705.2-201ENST00000428243 662 ntBASIC17.64■□□□□ 0.41
EXTL3O43909 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.64■□□□□ 0.41
EXTL3O43909 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.64■□□□□ 0.41
EXTL3O43909 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.64■□□□□ 0.41
EXTL3O43909 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.64■□□□□ 0.41
EXTL3O43909 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
EXTL3O43909 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.64■□□□□ 0.41
EXTL3O43909 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms