Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ITM2AO43736 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.05■□□□□ 0.16
ITM2AO43736 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.04■□□□□ 0.16
ITM2AO43736 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.04■□□□□ 0.16
ITM2AO43736 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.04■□□□□ 0.16
ITM2AO43736 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
ITM2AO43736 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.04■□□□□ 0.16
ITM2AO43736 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.04■□□□□ 0.16
ITM2AO43736 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.04■□□□□ 0.16
ITM2AO43736 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.04■□□□□ 0.16
ITM2AO43736 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 DUSP5P1-201ENST00000441325 1139 ntBASIC16.04■□□□□ 0.16
ITM2AO43736 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ITM2AO43736 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ITM2AO43736 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
ITM2AO43736 AC008608.2-201ENST00000606089 416 ntBASIC16.04■□□□□ 0.16
ITM2AO43736 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.04■□□□□ 0.16
ITM2AO43736 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.04■□□□□ 0.16
ITM2AO43736 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ITM2AO43736 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.04■□□□□ 0.16
ITM2AO43736 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ITM2AO43736 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ITM2AO43736 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.04■□□□□ 0.16
ITM2AO43736 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.04■□□□□ 0.16
ITM2AO43736 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ITM2AO43736 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.04■□□□□ 0.16
ITM2AO43736 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
ITM2AO43736 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
ITM2AO43736 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.03■□□□□ 0.16
ITM2AO43736 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.03■□□□□ 0.16
ITM2AO43736 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.03■□□□□ 0.16
ITM2AO43736 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ITM2AO43736 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.03■□□□□ 0.16
ITM2AO43736 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.03■□□□□ 0.16
ITM2AO43736 AL160237.2-201ENST00000556165 472 ntBASIC16.03■□□□□ 0.16
ITM2AO43736 AC021087.4-201ENST00000563761 564 ntBASIC16.03■□□□□ 0.16
ITM2AO43736 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.03■□□□□ 0.16
ITM2AO43736 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.03■□□□□ 0.16
ITM2AO43736 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.03■□□□□ 0.16
ITM2AO43736 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.03■□□□□ 0.16
ITM2AO43736 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
ITM2AO43736 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.03■□□□□ 0.16
ITM2AO43736 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
ITM2AO43736 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.03■□□□□ 0.16
ITM2AO43736 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.03■□□□□ 0.16
ITM2AO43736 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.03■□□□□ 0.16
ITM2AO43736 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.03■□□□□ 0.16
ITM2AO43736 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 AL109954.1-202ENST00000564051 2148 ntBASIC16.03■□□□□ 0.16
ITM2AO43736 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ITM2AO43736 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ITM2AO43736 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ITM2AO43736 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITM2AO43736 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITM2AO43736 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ITM2AO43736 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.02■□□□□ 0.16
ITM2AO43736 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ITM2AO43736 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITM2AO43736 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ITM2AO43736 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITM2AO43736 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ITM2AO43736 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ITM2AO43736 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITM2AO43736 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITM2AO43736 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.02■□□□□ 0.16
ITM2AO43736 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ITM2AO43736 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms