Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 GPX1P2-201ENST00000429271 606 ntBASIC14.55□□□□□ -0.08
TRAF3IP2O43734 SPDYE11-202ENST00000450699 704 ntBASIC14.55□□□□□ -0.08
TRAF3IP2O43734 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 AC079140.1-201ENST00000508039 487 ntBASIC14.55□□□□□ -0.08
TRAF3IP2O43734 YBX1P5-201ENST00000509441 847 ntBASIC14.55□□□□□ -0.08
TRAF3IP2O43734 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 AC005829.1-201ENST00000570002 483 ntBASIC14.55□□□□□ -0.08
TRAF3IP2O43734 SPDYE9P-201ENST00000570642 692 ntBASIC14.55□□□□□ -0.08
TRAF3IP2O43734 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 SPDYE10P-202ENST00000612005 668 ntBASIC14.55□□□□□ -0.08
TRAF3IP2O43734 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 SPDYE8P-202ENST00000612377 668 ntBASIC14.55□□□□□ -0.08
TRAF3IP2O43734 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 PCDHA1-201ENST00000378133 2726 ntBASIC14.55□□□□□ -0.08
TRAF3IP2O43734 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AC142381.1-201ENST00000426099 345 ntBASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 SPCS2P4-201ENST00000436160 681 ntBASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 TIMM8BP1-201ENST00000452384 211 ntBASIC14.54□□□□□ -0.08
TRAF3IP2O43734 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AC010327.4-202ENST00000591484 748 ntBASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAF3IP2O43734 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAF3IP2O43734 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms