Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SGCEO43556 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.52□□□□□ -0.08
SGCEO43556 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SGCEO43556 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SGCEO43556 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
SGCEO43556 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SGCEO43556 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SGCEO43556 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
SGCEO43556 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.52□□□□□ -0.08
SGCEO43556 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.08
SGCEO43556 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.52□□□□□ -0.09
SGCEO43556 PMS2P4-201ENST00000412466 1052 ntBASIC14.52□□□□□ -0.09
SGCEO43556 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.52□□□□□ -0.09
SGCEO43556 AC007967.2-201ENST00000432613 625 ntBASIC14.52□□□□□ -0.09
SGCEO43556 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.52□□□□□ -0.09
SGCEO43556 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
SGCEO43556 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.52□□□□□ -0.09
SGCEO43556 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.52□□□□□ -0.09
SGCEO43556 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.52□□□□□ -0.09
SGCEO43556 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.52□□□□□ -0.09
SGCEO43556 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
SGCEO43556 MIR3909-201ENST00000579518 119 ntBASIC14.52□□□□□ -0.09
SGCEO43556 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.52□□□□□ -0.09
SGCEO43556 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.52□□□□□ -0.09
SGCEO43556 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.52□□□□□ -0.09
SGCEO43556 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.52□□□□□ -0.09
SGCEO43556 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SGCEO43556 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
SGCEO43556 LINC01144-201ENST00000626198 1710 ntBASIC14.52□□□□□ -0.09
SGCEO43556 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SGCEO43556 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
SGCEO43556 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SGCEO43556 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.52□□□□□ -0.09
SGCEO43556 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.52□□□□□ -0.09
SGCEO43556 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SGCEO43556 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.51□□□□□ -0.09
SGCEO43556 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
SGCEO43556 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.51□□□□□ -0.09
SGCEO43556 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 BCAR1-209ENST00000546196 1340 ntBASIC14.51□□□□□ -0.09
SGCEO43556 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.51□□□□□ -0.09
SGCEO43556 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.51□□□□□ -0.09
SGCEO43556 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SGCEO43556 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.51□□□□□ -0.09
SGCEO43556 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.51□□□□□ -0.09
SGCEO43556 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SGCEO43556 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.51□□□□□ -0.09
SGCEO43556 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.51□□□□□ -0.09
SGCEO43556 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.51□□□□□ -0.09
SGCEO43556 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.51□□□□□ -0.09
SGCEO43556 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.51□□□□□ -0.09
SGCEO43556 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.51□□□□□ -0.09
SGCEO43556 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.51□□□□□ -0.09
SGCEO43556 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.51□□□□□ -0.09
SGCEO43556 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
SGCEO43556 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.51□□□□□ -0.09
SGCEO43556 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SGCEO43556 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SGCEO43556 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SGCEO43556 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.51□□□□□ -0.09
SGCEO43556 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SGCEO43556 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SGCEO43556 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.5□□□□□ -0.09
SGCEO43556 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.5□□□□□ -0.09
SGCEO43556 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SGCEO43556 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.5□□□□□ -0.09
SGCEO43556 CYP2T1P-202ENST00000641596 2535 ntBASIC14.5□□□□□ -0.09
SGCEO43556 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.5□□□□□ -0.09
SGCEO43556 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SGCEO43556 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SGCEO43556 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms