Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
NDUFA1O15239 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.24□□□□□ -0.61
NDUFA1O15239 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.23□□□□□ -0.61
NDUFA1O15239 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 LCK-206ENST00000373564 2137 ntTSL 5 BASIC11.23□□□□□ -0.61
NDUFA1O15239 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 PRAL-201ENST00000624952 3286 ntBASIC11.23□□□□□ -0.61
NDUFA1O15239 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.23□□□□□ -0.61
NDUFA1O15239 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 RCN1P2-201ENST00000398357 915 ntBASIC11.23□□□□□ -0.61
NDUFA1O15239 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 SPDYE21P-201ENST00000413323 827 ntBASIC11.23□□□□□ -0.61
NDUFA1O15239 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 AP000867.3-201ENST00000524675 377 ntBASIC11.23□□□□□ -0.61
NDUFA1O15239 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.23□□□□□ -0.61
NDUFA1O15239 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 AL009178.2-201ENST00000597278 2719 ntBASIC11.23□□□□□ -0.61
NDUFA1O15239 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
NDUFA1O15239 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
NDUFA1O15239 AC069224.1-201ENST00000566372 1715 ntBASIC11.23□□□□□ -0.61
NDUFA1O15239 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NDUFA1O15239 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
NDUFA1O15239 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.23□□□□□ -0.61
NDUFA1O15239 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NDUFA1O15239 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
NDUFA1O15239 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
NDUFA1O15239 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NDUFA1O15239 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
NDUFA1O15239 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NDUFA1O15239 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
NDUFA1O15239 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
NDUFA1O15239 MIR648-201ENST00000385046 94 ntBASIC11.22□□□□□ -0.61
NDUFA1O15239 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 AP002414.1-201ENST00000391405 1147 ntBASIC11.22□□□□□ -0.61
NDUFA1O15239 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.22□□□□□ -0.61
NDUFA1O15239 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.22□□□□□ -0.61
NDUFA1O15239 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
NDUFA1O15239 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.22□□□□□ -0.61
NDUFA1O15239 NUS1P1-201ENST00000446295 882 ntBASIC11.22□□□□□ -0.61
NDUFA1O15239 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
NDUFA1O15239 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.22□□□□□ -0.61
NDUFA1O15239 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
NDUFA1O15239 AC012615.1-201ENST00000565797 1299 ntBASIC11.22□□□□□ -0.61
NDUFA1O15239 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
NDUFA1O15239 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.22□□□□□ -0.61
NDUFA1O15239 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 AC092329.2-201ENST00000598402 547 ntBASIC11.22□□□□□ -0.61
NDUFA1O15239 SIGLEC16-201ENST00000599858 1437 ntBASIC11.22□□□□□ -0.61
NDUFA1O15239 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
NDUFA1O15239 AC016027.1-202ENST00000607927 1699 ntBASIC11.22□□□□□ -0.61
NDUFA1O15239 AC010331.1-201ENST00000611423 582 ntBASIC11.22□□□□□ -0.61
NDUFA1O15239 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.22□□□□□ -0.61
NDUFA1O15239 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.22□□□□□ -0.61
NDUFA1O15239 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 OR2I1P-210ENST00000642037 4691 ntBASIC11.22□□□□□ -0.61
NDUFA1O15239 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NDUFA1O15239 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms