Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATP2A1O14983 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A1O14983 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATP2A1O14983 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.6■□□□□ 0.57
ATP2A1O14983 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP2A1O14983 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.6■□□□□ 0.57
ATP2A1O14983 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.6■□□□□ 0.57
ATP2A1O14983 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 AC078925.2-201ENST00000624013 1973 ntBASIC18.6■□□□□ 0.57
ATP2A1O14983 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 HLA-A-202ENST00000376806 1854 ntBASIC18.6■□□□□ 0.57
ATP2A1O14983 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.6■□□□□ 0.57
ATP2A1O14983 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATP2A1O14983 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP2A1O14983 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP2A1O14983 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2A1O14983 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP2A1O14983 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A1O14983 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A1O14983 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ATP2A1O14983 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP2A1O14983 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP2A1O14983 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2A1O14983 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP2A1O14983 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A1O14983 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP2A1O14983 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2A1O14983 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2A1O14983 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A1O14983 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
ATP2A1O14983 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 AC004461.2-201ENST00000629517 803 ntBASIC18.59■□□□□ 0.57
ATP2A1O14983 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP2A1O14983 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ATP2A1O14983 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP2A1O14983 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
ATP2A1O14983 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 NFIC-211ENST00000641145 8399 ntBASIC18.59■□□□□ 0.57
ATP2A1O14983 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A1O14983 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ATP2A1O14983 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP2A1O14983 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
ATP2A1O14983 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP2A1O14983 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.58■□□□□ 0.57
ATP2A1O14983 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.58■□□□□ 0.57
ATP2A1O14983 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A1O14983 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A1O14983 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
ATP2A1O14983 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A1O14983 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A1O14983 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A1O14983 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A1O14983 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.58■□□□□ 0.57
ATP2A1O14983 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP2A1O14983 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.58■□□□□ 0.57
ATP2A1O14983 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP2A1O14983 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 HIST3H2BA-201ENST00000436555 524 ntBASIC18.58■□□□□ 0.56
ATP2A1O14983 POU5F1P6-201ENST00000466990 990 ntBASIC18.58■□□□□ 0.56
ATP2A1O14983 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.58■□□□□ 0.56
ATP2A1O14983 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 AC092337.1-201ENST00000568699 1129 ntBASIC18.58■□□□□ 0.56
ATP2A1O14983 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.58■□□□□ 0.56
ATP2A1O14983 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.58■□□□□ 0.56
ATP2A1O14983 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.58■□□□□ 0.56
ATP2A1O14983 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 CYP4F24P-201ENST00000586049 1580 ntBASIC18.58■□□□□ 0.56
ATP2A1O14983 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
ATP2A1O14983 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ATP2A1O14983 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP2A1O14983 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms