Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CACNB4O00305 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.11■□□□□ 0.17
CACNB4O00305 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.11■□□□□ 0.17
CACNB4O00305 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.11■□□□□ 0.17
CACNB4O00305 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CACNB4O00305 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CACNB4O00305 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CACNB4O00305 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.1■□□□□ 0.17
CACNB4O00305 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.1■□□□□ 0.17
CACNB4O00305 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CACNB4O00305 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.1■□□□□ 0.17
CACNB4O00305 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CACNB4O00305 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.1■□□□□ 0.17
CACNB4O00305 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.1■□□□□ 0.17
CACNB4O00305 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.1■□□□□ 0.17
CACNB4O00305 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.1■□□□□ 0.17
CACNB4O00305 LINC02084-201ENST00000606069 1096 ntBASIC16.1■□□□□ 0.17
CACNB4O00305 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.1■□□□□ 0.17
CACNB4O00305 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.1■□□□□ 0.17
CACNB4O00305 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.1■□□□□ 0.17
CACNB4O00305 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CACNB4O00305 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.1■□□□□ 0.17
CACNB4O00305 AC100757.3-201ENST00000622361 1406 ntBASIC16.1■□□□□ 0.17
CACNB4O00305 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.1■□□□□ 0.17
CACNB4O00305 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CACNB4O00305 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CACNB4O00305 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CACNB4O00305 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.09■□□□□ 0.17
CACNB4O00305 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CACNB4O00305 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CACNB4O00305 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.09■□□□□ 0.17
CACNB4O00305 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.09■□□□□ 0.17
CACNB4O00305 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.09■□□□□ 0.17
CACNB4O00305 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.09■□□□□ 0.17
CACNB4O00305 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.09■□□□□ 0.17
CACNB4O00305 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.09■□□□□ 0.17
CACNB4O00305 AC061975.2-201ENST00000581722 295 ntBASIC16.09■□□□□ 0.17
CACNB4O00305 AL365330.1-201ENST00000607459 531 ntBASIC16.09■□□□□ 0.17
CACNB4O00305 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.09■□□□□ 0.17
CACNB4O00305 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.09■□□□□ 0.17
CACNB4O00305 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.09■□□□□ 0.17
CACNB4O00305 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CACNB4O00305 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.09■□□□□ 0.17
CACNB4O00305 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CACNB4O00305 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CACNB4O00305 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms