Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 AL023775.1-201ENST00000454907 1746 ntBASIC15.63■□□□□ 0.09
PDLIM1O00151 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.63■□□□□ 0.09
PDLIM1O00151 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
PDLIM1O00151 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.63■□□□□ 0.09
PDLIM1O00151 REXO1L2P-201ENST00000425429 2069 ntBASIC15.63■□□□□ 0.09
PDLIM1O00151 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM1O00151 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
PDLIM1O00151 NUS1P2-201ENST00000417358 873 ntBASIC15.63■□□□□ 0.09
PDLIM1O00151 UNC93B7-201ENST00000509439 705 ntBASIC15.63■□□□□ 0.09
PDLIM1O00151 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.63■□□□□ 0.09
PDLIM1O00151 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM1O00151 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM1O00151 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.63■□□□□ 0.09
PDLIM1O00151 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PDLIM1O00151 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PDLIM1O00151 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
PDLIM1O00151 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.63■□□□□ 0.09
PDLIM1O00151 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.63■□□□□ 0.09
PDLIM1O00151 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.63■□□□□ 0.09
PDLIM1O00151 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PDLIM1O00151 AC007191.1-201ENST00000623179 2995 ntBASIC15.63■□□□□ 0.09
PDLIM1O00151 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.63■□□□□ 0.09
PDLIM1O00151 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.62■□□□□ 0.09
PDLIM1O00151 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 AL671710.1-201ENST00000610245 2349 ntBASIC15.62■□□□□ 0.09
PDLIM1O00151 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 LINC00528-201ENST00000600723 2160 ntBASIC15.62■□□□□ 0.09
PDLIM1O00151 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PDLIM1O00151 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 AC132938.5-201ENST00000624980 1813 ntBASIC15.62■□□□□ 0.09
PDLIM1O00151 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PDLIM1O00151 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.62■□□□□ 0.09
PDLIM1O00151 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.62■□□□□ 0.09
PDLIM1O00151 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.62■□□□□ 0.09
PDLIM1O00151 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.62■□□□□ 0.09
PDLIM1O00151 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.62■□□□□ 0.09
PDLIM1O00151 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.62■□□□□ 0.09
PDLIM1O00151 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.62■□□□□ 0.09
PDLIM1O00151 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PDLIM1O00151 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.62■□□□□ 0.09
PDLIM1O00151 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PDLIM1O00151 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PDLIM1O00151 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PDLIM1O00151 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PDLIM1O00151 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.62■□□□□ 0.09
PDLIM1O00151 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.62■□□□□ 0.09
PDLIM1O00151 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PDLIM1O00151 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PDLIM1O00151 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
PDLIM1O00151 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM1O00151 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM1O00151 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM1O00151 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM1O00151 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.61■□□□□ 0.09
PDLIM1O00151 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
PDLIM1O00151 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PDLIM1O00151 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms