Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC188H7C350 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.01■□□□□ 0.31
CCDC188H7C350 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
CCDC188H7C350 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC188H7C350 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCDC188H7C350 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCDC188H7C350 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCDC188H7C350 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17■□□□□ 0.31
CCDC188H7C350 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC188H7C350 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17■□□□□ 0.31
CCDC188H7C350 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17■□□□□ 0.31
CCDC188H7C350 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17■□□□□ 0.31
CCDC188H7C350 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17■□□□□ 0.31
CCDC188H7C350 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CCDC188H7C350 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17■□□□□ 0.31
CCDC188H7C350 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17■□□□□ 0.31
CCDC188H7C350 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17■□□□□ 0.31
CCDC188H7C350 AC092119.3-201ENST00000612618 583 ntBASIC17■□□□□ 0.31
CCDC188H7C350 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
CCDC188H7C350 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CCDC188H7C350 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17■□□□□ 0.31
CCDC188H7C350 AC012569.1-201ENST00000591191 1524 ntBASIC17■□□□□ 0.31
CCDC188H7C350 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17■□□□□ 0.31
CCDC188H7C350 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC188H7C350 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC188H7C350 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC188H7C350 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 NFIC-211ENST00000641145 8399 ntBASIC16.99■□□□□ 0.31
CCDC188H7C350 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC188H7C350 FGFR3P6-201ENST00000457012 610 ntBASIC16.99■□□□□ 0.31
CCDC188H7C350 RPS15P9-201ENST00000494093 319 ntBASIC16.99■□□□□ 0.31
CCDC188H7C350 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.99■□□□□ 0.31
CCDC188H7C350 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC188H7C350 AL732292.2-201ENST00000609649 430 ntBASIC16.99■□□□□ 0.31
CCDC188H7C350 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC188H7C350 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC188H7C350 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC188H7C350 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC188H7C350 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC188H7C350 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC188H7C350 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC188H7C350 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC188H7C350 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC188H7C350 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC188H7C350 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC188H7C350 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC188H7C350 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC188H7C350 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
CCDC188H7C350 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC188H7C350 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC188H7C350 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC188H7C350 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC188H7C350 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
CCDC188H7C350 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC188H7C350 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 LAGE3P1-201ENST00000425356 484 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms