Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 ALG1L8P-201ENST00000533887 760 ntBASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 AC027307.2-201ENST00000591252 911 ntBASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 AC063926.2-201ENST00000623766 1308 ntBASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 AL021920.2-201ENST00000624828 1351 ntBASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.09■□□□□ 0.17
TMX2-CTNND1H3BSU7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMX2-CTNND1H3BSU7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TMX2-CTNND1H3BSU7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TMX2-CTNND1H3BSU7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TMX2-CTNND1H3BSU7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TMX2-CTNND1H3BSU7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TMX2-CTNND1H3BSU7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 MIR346-201ENST00000362234 95 ntBASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 SPDYE14P-201ENST00000442619 822 ntBASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 MIR6080-201ENST00000617359 66 ntBASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 AC008677.1-201ENST00000519230 1561 ntBASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 TSPY26P-202ENST00000565928 3884 ntBASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.16
TMX2-CTNND1H3BSU7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 SLC25A39P2-201ENST00000537614 270 ntBASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 AP000842.3-202ENST00000569238 1080 ntBASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 AC021097.1-201ENST00000607902 574 ntBASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 FO538757.1-201ENST00000623083 1397 ntBASIC16.07■□□□□ 0.16
TMX2-CTNND1H3BSU7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms