Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.51□□□□□ -0.41
COLCA2A8K830 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
COLCA2A8K830 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.51□□□□□ -0.41
COLCA2A8K830 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
COLCA2A8K830 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.51□□□□□ -0.41
COLCA2A8K830 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.51□□□□□ -0.41
COLCA2A8K830 AL135999.2-201ENST00000622438 1686 ntBASIC12.51□□□□□ -0.41
COLCA2A8K830 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
COLCA2A8K830 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
COLCA2A8K830 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
COLCA2A8K830 LINC01144-201ENST00000626198 1710 ntBASIC12.51□□□□□ -0.41
COLCA2A8K830 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COLCA2A8K830 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 AC011477.6-201ENST00000604980 1927 ntBASIC12.5□□□□□ -0.41
COLCA2A8K830 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.5□□□□□ -0.41
COLCA2A8K830 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 AC152010.1-201ENST00000415779 2006 ntBASIC12.5□□□□□ -0.41
COLCA2A8K830 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.5□□□□□ -0.41
COLCA2A8K830 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
COLCA2A8K830 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 AL356441.2-201ENST00000443009 864 ntBASIC12.5□□□□□ -0.41
COLCA2A8K830 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.5□□□□□ -0.41
COLCA2A8K830 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
COLCA2A8K830 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
COLCA2A8K830 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.5□□□□□ -0.41
COLCA2A8K830 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.5□□□□□ -0.41
COLCA2A8K830 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
COLCA2A8K830 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COLCA2A8K830 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
COLCA2A8K830 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 ZBED1P1-201ENST00000502364 1930 ntBASIC12.49□□□□□ -0.41
COLCA2A8K830 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 SNX33P1-201ENST00000592116 1762 ntBASIC12.49□□□□□ -0.41
COLCA2A8K830 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.49□□□□□ -0.41
COLCA2A8K830 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.49□□□□□ -0.41
COLCA2A8K830 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
COLCA2A8K830 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
COLCA2A8K830 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms