Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 AC093724.1-201ENST00000448659 1027 ntBASIC13.17□□□□□ -0.3
SRRM4A7MD48 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SRRM4A7MD48 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.17□□□□□ -0.3
SRRM4A7MD48 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 AC069224.1-201ENST00000566372 1715 ntBASIC13.16□□□□□ -0.3
SRRM4A7MD48 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 PRAL-201ENST00000624952 3286 ntBASIC13.16□□□□□ -0.3
SRRM4A7MD48 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 AC016027.1-202ENST00000607927 1699 ntBASIC13.16□□□□□ -0.3
SRRM4A7MD48 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 KRT18P34-201ENST00000488218 1270 ntBASIC13.16□□□□□ -0.3
SRRM4A7MD48 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 AL078644.1-201ENST00000609881 752 ntBASIC13.16□□□□□ -0.3
SRRM4A7MD48 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 AL596257.1-201ENST00000641463 2694 ntBASIC13.16□□□□□ -0.3
SRRM4A7MD48 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.16□□□□□ -0.3
SRRM4A7MD48 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRRM4A7MD48 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SRRM4A7MD48 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRRM4A7MD48 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRRM4A7MD48 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.15□□□□□ -0.3
SRRM4A7MD48 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRRM4A7MD48 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SRRM4A7MD48 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SRRM4A7MD48 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRRM4A7MD48 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SRRM4A7MD48 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms