Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 AP002472.1-201ENST00000577490 586 ntBASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 AC091812.2-201ENST00000619081 385 ntBASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 C20orf181-201ENST00000623918 480 ntBASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PRAMEF25A6NGN4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 LINC02447-202ENST00000501888 2146 ntBASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 GPX1P2-201ENST00000429271 606 ntBASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 ALG1L5P-201ENST00000482043 771 ntBASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 MIR3909-201ENST00000579518 119 ntBASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 AL009183.1-201ENST00000603760 355 ntBASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 AC126177.1-201ENST00000547829 2218 ntBASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PRAMEF25A6NGN4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 PMS2P4-201ENST00000412466 1052 ntBASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 UPF3AP3-201ENST00000420996 769 ntBASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 HTR5BP-201ENST00000430851 1154 ntBASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
PRAMEF25A6NGN4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms