Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
HFM1A2PYH4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HFM1A2PYH4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HFM1A2PYH4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC23.83■■□□□ 1.41
HFM1A2PYH4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HFM1A2PYH4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
HFM1A2PYH4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
HFM1A2PYH4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
HFM1A2PYH4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC23.83■■□□□ 1.4
HFM1A2PYH4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC23.83■■□□□ 1.4
HFM1A2PYH4 NME4-207ENST00000450036 985 ntTSL 3 BASIC23.83■■□□□ 1.4
HFM1A2PYH4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC23.83■■□□□ 1.4
HFM1A2PYH4 API5-211ENST00000534695 560 ntTSL 5 BASIC23.83■■□□□ 1.4
HFM1A2PYH4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC23.83■■□□□ 1.4
HFM1A2PYH4 WASH4P-201ENST00000564273 1246 ntBASIC23.83■■□□□ 1.4
HFM1A2PYH4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC23.83■■□□□ 1.4
HFM1A2PYH4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
HFM1A2PYH4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
HFM1A2PYH4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 PIN1P1-201ENST00000412108 996 ntBASIC23.82■■□□□ 1.4
HFM1A2PYH4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 AC093004.1-201ENST00000508850 424 ntBASIC23.82■■□□□ 1.4
HFM1A2PYH4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC23.82■■□□□ 1.4
HFM1A2PYH4 AC099568.2-201ENST00000609194 695 ntBASIC23.82■■□□□ 1.4
HFM1A2PYH4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HFM1A2PYH4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC23.81■■□□□ 1.4
HFM1A2PYH4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 AC124067.4-201ENST00000519691 2379 ntBASIC23.81■■□□□ 1.4
HFM1A2PYH4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 DFFBP1-201ENST00000433250 979 ntBASIC23.81■■□□□ 1.4
HFM1A2PYH4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 AL450472.2-201ENST00000603663 1156 ntBASIC23.81■■□□□ 1.4
HFM1A2PYH4 AL158212.4-201ENST00000624062 1286 ntBASIC23.81■■□□□ 1.4
HFM1A2PYH4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC23.81■■□□□ 1.4
HFM1A2PYH4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 PCDHB19P-201ENST00000570871 2371 ntBASIC23.81■■□□□ 1.4
HFM1A2PYH4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HFM1A2PYH4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
HFM1A2PYH4 SLC7A15P-201ENST00000424028 1363 ntBASIC23.8■■□□□ 1.4
HFM1A2PYH4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC23.8■■□□□ 1.4
HFM1A2PYH4 AC084018.2-201ENST00000613093 2607 ntBASIC23.8■■□□□ 1.4
HFM1A2PYH4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HFM1A2PYH4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
HFM1A2PYH4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC23.8■■□□□ 1.4
HFM1A2PYH4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC23.8■■□□□ 1.4
HFM1A2PYH4 GNAQP1-201ENST00000444815 1067 ntBASIC23.8■■□□□ 1.4
HFM1A2PYH4 DOC2GP-202ENST00000514950 1163 ntBASIC23.8■■□□□ 1.4
HFM1A2PYH4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC23.8■■□□□ 1.4
HFM1A2PYH4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HFM1A2PYH4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
HFM1A2PYH4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
HFM1A2PYH4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HFM1A2PYH4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HFM1A2PYH4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC23.8■■□□□ 1.4
HFM1A2PYH4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
HFM1A2PYH4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HFM1A2PYH4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HFM1A2PYH4 CDC14C-201ENST00000428251 1719 ntBASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms