Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 AC009053.2-201ENST00000563701 2365 ntBASIC20.48■□□□□ 0.87
LOC102724428A0A0B4J2F2 MSTO2P-201ENST00000314835 1709 ntBASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 AL133373.2-201ENST00000623187 2828 ntBASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 AC120045.2-201ENST00000567334 178 ntBASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LOC102724428A0A0B4J2F2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 BNIP3P1-202ENST00000550043 1585 ntBASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 C1QBPP1-201ENST00000400117 770 ntBASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 BAATP1-201ENST00000412284 1225 ntBASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 AC245100.5-201ENST00000452108 331 ntBASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 RPL13AP25-201ENST00000484130 612 ntBASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 AL049840.4-201ENST00000602422 811 ntBASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 AC139713.2-201ENST00000641328 2723 ntBASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LOC102724428A0A0B4J2F2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LOC102724428A0A0B4J2F2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms