Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC136632.2-201ENST00000512891 861 ntBASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 LINC01711-201ENST00000598340 967 ntBASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC023908.3-201ENST00000564211 3047 ntBASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC069224.1-201ENST00000566372 1715 ntBASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRBV6-7A0A0A0MS04 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 AL109954.1-202ENST00000564051 2148 ntBASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 AF238378.1-201ENST00000526806 358 ntBASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 PRELID1P1-202ENST00000567272 903 ntBASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC008667.4-201ENST00000607370 168 ntBASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV6-7A0A0A0MS04 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 GRK6P1-201ENST00000400595 1711 ntBASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 TMBIM7P-203ENST00000641617 1718 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms