Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 FXNP2-201ENST00000411625 547 ntBASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 AC104306.2-201ENST00000451877 341 ntBASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTCH2Q9Y6C5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 BAATP1-201ENST00000412284 1225 ntBASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AC106760.1-201ENST00000508690 800 ntBASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 KRT90P-201ENST00000549264 1064 ntBASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AC015967.2-201ENST00000624092 234 ntBASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AC006435.4-201ENST00000625037 234 ntBASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AL356737.1-201ENST00000634391 234 ntBASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AC008687.7-202ENST00000637404 953 ntBASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 MSTO2P-201ENST00000314835 1709 ntBASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCH2Q9Y6C5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 AL607033.1-201ENST00000623900 1599 ntBASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 AC134915.1-201ENST00000426461 574 ntBASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms