Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PCDHGA11Q9Y5H2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
PCDHGA11Q9Y5H2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 ZNF259P1-201ENST00000407656 1365 ntBASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 AL590627.1-203ENST00000421194 1026 ntBASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 AL009183.1-201ENST00000603760 355 ntBASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 AC004877.2-201ENST00000623941 599 ntBASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 AL596087.1-201ENST00000400979 1969 ntBASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.89■□□□□ 0.13
PCDHGA11Q9Y5H2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 AC025580.3-201ENST00000617932 1424 ntBASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 AC140658.5-201ENST00000438532 169 ntBASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms