Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 BX005266.1-201ENST00000473402 457 ntBASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 AL662844.1-201ENST00000546340 181 ntBASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 AC093525.9-201ENST00000624961 1746 ntBASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 AC093909.1-201ENST00000504731 1122 ntBASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 AC026748.1-201ENST00000624349 3251 ntBASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
R3HCC1Q9Y3T6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 AL359258.3-201ENST00000622910 2331 ntBASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 AC026396.1-201ENST00000419388 421 ntBASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 KRT18P67-201ENST00000432816 1264 ntBASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 RNPS1P1-201ENST00000507437 918 ntBASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 AP002469.2-201ENST00000531724 424 ntBASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 SART3-203ENST00000546611 1184 ntBASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 MTDHP4-201ENST00000600287 670 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms