Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PTCHD3P3-201ENST00000403073 906 ntBASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 HCG4-201ENST00000418983 998 ntBASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PCED1CP-201ENST00000419887 785 ntBASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 AC132008.2-207ENST00000454517 770 ntBASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 AC005412.3-201ENST00000580309 715 ntBASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 MIR3180-1-201ENST00000580374 94 ntBASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 MIR3180-3-201ENST00000584616 94 ntBASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 AC004706.3-202ENST00000621574 984 ntBASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 AC092919.2-201ENST00000623631 1645 ntBASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
UBE2D4Q9Y2X8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 AC005622.1-201ENST00000636801 1703 ntBASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 TNRC18P2-201ENST00000417666 2714 ntBASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 SSR4P1-203ENST00000599569 2260 ntBASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 RBM17P3-201ENST00000417687 1192 ntBASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 KRT16P4-201ENST00000453883 522 ntBASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 AC107918.2-201ENST00000530817 355 ntBASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
UBE2D4Q9Y2X8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms