Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC124067.4-201ENST00000519691 2379 ntBASIC19.58■□□□□ 0.72
ZC3H4Q9UPT8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZC3H4Q9UPT8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ZC3H4Q9UPT8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZC3H4Q9UPT8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZC3H4Q9UPT8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 SOCS2P1-201ENST00000417727 557 ntBASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 NUS1P3-201ENST00000423502 862 ntBASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AC026954.1-201ENST00000429771 1293 ntBASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AC253536.4-201ENST00000440539 267 ntBASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 RPL13AP25-201ENST00000484130 612 ntBASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AC091804.1-201ENST00000486888 567 ntBASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AC138028.6-201ENST00000616106 1482 ntBASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZC3H4Q9UPT8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 SCARNA20.5-201ENST00000516991 142 ntBASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 AC105129.2-201ENST00000559536 390 ntBASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 MIR4722-201ENST00000578292 60 ntBASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZC3H4Q9UPT8 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 AL662890.1-201ENST00000396818 632 ntBASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 BAATP1-201ENST00000412284 1225 ntBASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 AC012441.1-201ENST00000446669 685 ntBASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 AKR7A2P1-201ENST00000460134 915 ntBASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms