Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 SNX33P1-201ENST00000592116 1762 ntBASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PDZRN3Q9UPQ7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 MRPS18AP1-201ENST00000414458 589 ntBASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 AC013467.2-201ENST00000605472 835 ntBASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 AL590560.3-201ENST00000623350 461 ntBASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDZRN3Q9UPQ7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 RNU1-129P-201ENST00000384064 167 ntBASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 MEIS3P1-201ENST00000495167 958 ntBASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 U1.21-201ENST00000580816 167 ntBASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 MIR4453-201ENST00000584019 89 ntBASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 AL031055.1-201ENST00000606362 631 ntBASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 ME2P1-201ENST00000426028 1970 ntBASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PDZRN3Q9UPQ7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
PDZRN3Q9UPQ7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PDZRN3Q9UPQ7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PDZRN3Q9UPQ7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PDZRN3Q9UPQ7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDZRN3Q9UPQ7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms