Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 TREML5P-201ENST00000421694 576 ntBASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 ALG1L8P-201ENST00000533887 760 ntBASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 AC140878.1-201ENST00000565277 250 ntBASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 AP000842.3-202ENST00000569238 1080 ntBASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 AC068587.6-202ENST00000641839 5619 ntBASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 AC092171.3-201ENST00000610122 2651 ntBASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 AL390754.1-201ENST00000619088 582 ntBASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 AC084121.4-201ENST00000641598 221 ntBASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 AF228730.8-201ENST00000642140 221 ntBASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 UBALD1-205ENST00000590891 2641 ntBASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPIPA1Q9UND3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPA1Q9UND3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
NPIPA1Q9UND3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPA1Q9UND3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPA1Q9UND3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPA1Q9UND3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPA1Q9UND3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPA1Q9UND3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NPIPA1Q9UND3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.08■□□□□ 0
NPIPA1Q9UND3 AC006277.1-201ENST00000624348 1610 ntBASIC15.08■□□□□ 0
NPIPA1Q9UND3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.08■□□□□ 0
NPIPA1Q9UND3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms