Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 AC105233.2-201ENST00000523697 349 ntBASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 AF228730.5-201ENST00000530288 346 ntBASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.39■□□□□ 0.69
CLIP2Q9UDT6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 FER1L4-210ENST00000615531 5998 ntBASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 AC142381.1-201ENST00000426099 345 ntBASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 AC067863.1-201ENST00000494933 530 ntBASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 PRYP6-201ENST00000514804 343 ntBASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 AC051619.7-201ENST00000568314 623 ntBASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 AC073389.1-201ENST00000595595 795 ntBASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLIP2Q9UDT6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 AC005498.2-205ENST00000593218 784 ntBASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 AC073439.1-201ENST00000624121 1774 ntBASIC19.37■□□□□ 0.69
CLIP2Q9UDT6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms