Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PPARGC1AQ9UBK2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 CEND1P1-201ENST00000451006 455 ntBASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 RN7SL589P-201ENST00000481268 310 ntBASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.07■□□□□ 0.32
PPARGC1AQ9UBK2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 CYP2T1P-202ENST00000641596 2535 ntBASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 LINC00554-201ENST00000564841 3011 ntBASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 AL135744.1-201ENST00000565098 629 ntBASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 AC026120.1-201ENST00000611536 926 ntBASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PPARGC1AQ9UBK2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.05■□□□□ 0.32
PPARGC1AQ9UBK2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms